| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1146 |
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| Symbol | |
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| ID | 5208097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1429027 |
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| End bp | 1432302 |
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| Gene Length | 3276 bp |
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| Protein Length | 1091 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640594763 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001275503 |
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| Protein GI | 148655298 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000383652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCAGGCA ATCGCGCATT GTTCGACCGT GCTATGGAGC AAAGCCGCGA GGCTGCGCGG
CTCATGAACT GGGACGAGGC GCTGAAACAG GCGGTTCGCG CGCTTCAGGA GTTTCCCCAG
GATCTCGACG CACGCTCAGC CGCTGCGGTG GCGCTCTTCA ACACAGCAAA ATATGTACAG
GCGCTCCAGA TGTTCGATGA ACTGCGCCGC GCCGACGCCA GCAATCCGTT CTATCTGGAA
TACCTGGCGC GCACCCATGA GCGTCTCGGC GATCCAAAGG CGGCAACCAC TGCCTATGTG
CAACTCGCCG ATCTCCAGAT CAGTCGAAAA CTGGCAGCGC GTGCGATCGA TGCGTTGCGT
GAAGCGCTGC GCCTGCAACC CGATGCCGAT GATCAGCGGG CGCGCCTGGC ACAGTTGCTC
GCCGATCAGG GTGCACGGGC GGAAGCGGCA GCGCAATACC TCGATCTGGC GCGACGCGCG
CAGGCGCACG GGCGCCTCGA ACAGGCGGTG GATCTGGCGG AAACGGCGCT GCGCTATGAG
CCGGACAACC GCGAAGCCAA AGAATTGATT GCTGCACTTC ATGACGCCCT GGCGACAACA
CTTCAATCAG CAATCGAAGC GACGCCTGCT GCCACCGAGG CAATCCCGCT CCCGATCGCC
GGAACCGGCG GTCTGCGCAG CGCACAGATC GCAGTCGAAC GCATCGTTGC ACTGGCGCAC
GAACGGCAGG AGGCCGGTGA TATCGATGGC GCCATCGAAC AGTATGAGCG CGCACTGAAA
CTGGGCGCCG ACCGGAGTGA TGTCTTTTAC AGCCTGGGAC TGCTGTACCA GGAACGGGGC
GACTATCAGC GCGCTATCGA GTTGCTGCAG AGCGCCGCCG GTGATCAGGA GTACGCGCTC
TCGGCGCACT ATATGCTCGG TCAGGCGTAT CAGGAGTTGG GGAAACTTCC CGAAGCAGCG
CACGAGTATG AACAGACCAT TCGCCTCCTG CCGCTGGAGT CGATCGGGCG CGCCGAAGCC
GACGATATGA TCCAGATGTA CGAGAGCGCA GCGCAGATCT ATATCCAACT CAACGACATT
GCACGCGCGG CGACTCTCTA CTCAACGCTG GCAAATTTCC TCCAGAGCAA ACGCTGGGGG
CGCGAGCGCG CCGATGAGTT TCGTCAGAAA GCCAAAGATC TGACCGAACG AAACATGTTC
GCCAAGCTCC GCACGCTTGG CACCGGCGCA CTCTCACTCC AACCGCCCGC TCCAGAACCC
GAACCGCCGC CCGAAAGCCC CATGCCCGAA ACATGGGGCA AGATCCGACC GATCACCGAC
TTCTTGCGCG CGCCCGAAGA ACAAAAGAAG GATGAGACCC GATTCGAAAC CACTCCTGTT
GCCGTCGAAC CGATCGATCC GCTGGCGGCG CTCGAAGCGC TGCCACCTCC TGAACGCGCT
CCGACTGCGC CGGTTACTCC ACTCGATACG ACCGGATTGG ACGAACTGTG TGAGCGGTAT
GTGCAGGCAA GCGAAAAATA CATCGAGCAG GGACTGATGC TGGCAGCCAA CGATGCCTGC
ATGGAAGTCA TCCGGCTCAA CCCGGATTAC CTTCCGATCC ATCTGCGGTT GGGCGAGATT
TATGAACGTG ATGGCCGCAG AGATGAGGCA TTGATCAAGT ATCAGTTGCT GATCGACACG
TATGTGGCGC GTGGTGAACC GCGACGTGCC ATTGATGTCT ACTATCGCCT GATCGAGTTA
TCCCCCGATA CGATCCTGCC GCGTTCGCGG CTGGCAGAAT TATTACGCGC CGAAGGACGC
AACGAAGAAG CCGCTCAACA ACTTTCTGTG GTGGCTGGCG CCTATTTCCG CATGGGGCAG
ACCAATAAAG CGCTCGAAGA GTACCGTCGC GCGCTGCAAT GGTCGCCTGC CAGCGCCGAT
CTCCACGCGC AGTATGGCCA GGCGCTGCTG AAACTCGAAC GCACCGAGGC GGCGCTGGTT
GCCTTCCGCC GCGCCCTCGA ACTCGATCAG CAGAATCCGG TCAACATCGC GCGCATCAAC
CTGACGCTGG CGATCATGGG AGAACAATCG GTCGCCGTCT GGCAATCGCT GGCAACCCTG
CTCGAACAGA TCAAACAGCA TCCGCAGCGC CTGAATGACG TGCAGGCGGA ATATCGCGCT
GCATTTCTGA TCGCCGATCT ACCGGTTCTC CACTATATTC TCGGAATCAT CCAGCAAAAC
GCCGGTCAGC ATCAGTCGGC AATCCTTGAG TTCGAACAGG CGCTCGAACT GCTGCAGAAC
GAGCGCGATC CATTCCTGAC GTTGCATCTT GTTCATCAAG CGCTGGCAGA CAGTCACATC
GCGCTGGGTC AGGCTGGCGA GGCGCTGGAG CAACTCCAGC GCTGCCTTGC ACTGGAACCG
GCAGCGCCGC CTCCCGATAG CGCCCGCTAT CCCTTCTCGA CGCCACTCTC CCAGGGTGAA
ATTGTGCGTC GCATGGCGGA AGCGTATGCT GCAGTCGGCG ATCTGGCGGG CGCTGAACGC
GCCTTGCAGG AAGCCAAGCA GTTCCTCCCC TACGATCGGG CGATCTATAC GAAACTCTCT
GATATTTATT TCCGTCAGGG TCGCCTGAAC GAAGCGCTGG CGCAACTCGA AGAACTGGCA
AGCCACTATG AACAGCGTCA AATGCTGGAT CGCGCTATCG AAGCTCTTGA AAGCGCGCTG
CGCCTGGCGC CGAATAATAC TGCAATCGGC AACCGCCTGG CGAAAATGTA TATCCGACGC
GGTTACCTGG ATAAGGGCAT CGAAGCGCTG GTGCGTGTCG CCGACTTACA GCGCAAAGAG
GGGCAGATCA AGGATGCCGT CGCCAGCCTG CAACAGGCGG CTGAAGTTCA CTGGACGCTC
GGCAAACACG CCGAGGCGCG CGCATTGTAC GACAAAATCG TGCATATCGC GCCCAACGAT
ATCGAAGCGC GCCAGTGGCT TTCGTTCATG TATACGCTGG CAGGCATGAC GCGCGAAGCT
ATTGCGCAAA AGAAGCAGAT TATCCGTATT CTGCTCCAGC GCCGCGATCT GGATAATGCA
ATCGCCGAAA TGCACCAGAT CTACGGATTG GATCAGAACG ATACTGACAA TCTGTTCCAG
TTGGGCGATG CCCTTATGCG TCGGCAGGAG TATGAACAGG CTATTCGCAT CTACAACCGC
CTGGCAAAAC TGCCAGACGT GGAGATTGAG CGTGTCGAAG CATTGCAGGC AGCAGCCAGA
CGCATGCTCG AACAGCAACA GGCAGAGAAA CGGTGA
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| Protein sequence | MPGNRALFDR AMEQSREAAR LMNWDEALKQ AVRALQEFPQ DLDARSAAAV ALFNTAKYVQ
ALQMFDELRR ADASNPFYLE YLARTHERLG DPKAATTAYV QLADLQISRK LAARAIDALR
EALRLQPDAD DQRARLAQLL ADQGARAEAA AQYLDLARRA QAHGRLEQAV DLAETALRYE
PDNREAKELI AALHDALATT LQSAIEATPA ATEAIPLPIA GTGGLRSAQI AVERIVALAH
ERQEAGDIDG AIEQYERALK LGADRSDVFY SLGLLYQERG DYQRAIELLQ SAAGDQEYAL
SAHYMLGQAY QELGKLPEAA HEYEQTIRLL PLESIGRAEA DDMIQMYESA AQIYIQLNDI
ARAATLYSTL ANFLQSKRWG RERADEFRQK AKDLTERNMF AKLRTLGTGA LSLQPPAPEP
EPPPESPMPE TWGKIRPITD FLRAPEEQKK DETRFETTPV AVEPIDPLAA LEALPPPERA
PTAPVTPLDT TGLDELCERY VQASEKYIEQ GLMLAANDAC MEVIRLNPDY LPIHLRLGEI
YERDGRRDEA LIKYQLLIDT YVARGEPRRA IDVYYRLIEL SPDTILPRSR LAELLRAEGR
NEEAAQQLSV VAGAYFRMGQ TNKALEEYRR ALQWSPASAD LHAQYGQALL KLERTEAALV
AFRRALELDQ QNPVNIARIN LTLAIMGEQS VAVWQSLATL LEQIKQHPQR LNDVQAEYRA
AFLIADLPVL HYILGIIQQN AGQHQSAILE FEQALELLQN ERDPFLTLHL VHQALADSHI
ALGQAGEALE QLQRCLALEP AAPPPDSARY PFSTPLSQGE IVRRMAEAYA AVGDLAGAER
ALQEAKQFLP YDRAIYTKLS DIYFRQGRLN EALAQLEELA SHYEQRQMLD RAIEALESAL
RLAPNNTAIG NRLAKMYIRR GYLDKGIEAL VRVADLQRKE GQIKDAVASL QQAAEVHWTL
GKHAEARALY DKIVHIAPND IEARQWLSFM YTLAGMTREA IAQKKQIIRI LLQRRDLDNA
IAEMHQIYGL DQNDTDNLFQ LGDALMRRQE YEQAIRIYNR LAKLPDVEIE RVEALQAAAR
RMLEQQQAEK R
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