| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1100 |
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| Symbol | |
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| ID | 5208047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1375091 |
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| End bp | 1376977 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640594714 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001275458 |
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| Protein GI | 148655253 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000283415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCCCCGCC ATCTTCTGCC GGTCGTTGCC GTAACAGTCG CCGGAACCGG CACCCTGCTG
GTCGCTGCGC CGGGATGGGT CATTGCCGGC GCCGTCTTCC TCATCTGCGG CGCGTGGTTA
TCCGCACTCG CGCCCGGTCG CTCGTCCGGC GTTCGTCCGG CAGCGCCATC GTCCATACCT
TCCCCCAATC CCTGGCAGCA CGTCGCTCTT GGGAGCATCG TCACCATTGC GCTTGTGAGC
ATACTTGTCC CCGGAATAGC AGATACAGAG AGCCGCTATC ATGTCGATGA GAGCTACTGG
GTTCCGGTGG GTGTTCAGGC ATTTCGAACC GCATTTATCG AGCGCGATCT AGACCATCAG
TTTTGGTTTG ATTATCTCAT GAAATTCGGT TCACCCCATC CGCAGATCGG CAAATATATC
ATCGGCGCCG GAGCATACCT GGCCGGGTAT CACGATGTGC CGTTGCTGCC GTATGACTTT
GGGCAAGACC TGGCGTGGAA CAAGGCGCAC GGACGGGTCT TGCCGCCGGA GATTGTCGGC
GCGGCACGTC TCTCCGTTGC ACTCACCGGC GCGCTGTGCG GGGCGTTCCT CTACTGGCTC
GGCGTCCAGG TCGCCGGACC TGTCACCGGC ATCCTCGCCG TCGTTTTGTT TATTGCAACG
CCAGCCGTAT GGAATCTCGC TCGCCTCGCT ATGCTGGATA TTCCCGCGCT GATGTTCGGA
CTGCTTGCGC TGAATCTGGG TATCCGCGCA GTGACCGCTC TGCGCACGGG GTCCGCCAAC
GCTGGCGCGT GGATTGCAGC CTGCGGCGCC GCCTGCGGCG CTGCCGTCGG CGCTAAACTG
AATGCGTTGC TTATTCCCGG CATCTGCATC CTTGCGATGT GTTTGACCGG CGTTGCGCAC
CAGCACCAAT CTGACAGGTA CACATTGATC TCGGGCGTTG TGTCACTTCT CCTCTGGACG
TGGGTGGTTT TCTTCTTATC CAATCCCATG CTTTACCCCC ATCCCGTCGC TGGCATACAG
CACATGCTTG ACATGAGCAG AATAGCGGCC TCAGGCGAGT TCGCTCCGCT CCCGACGCTG
GCATCGCGCA TCAGCGCAGT CTGGACGAGT CTCGGCGACG GTGGAGGTAT CGGCAGCGGC
GGCTTGCCTG GCAGTCGGCT CTGGCTGATC ATTGGCGCTA TCTTCCTGGC TCGCGCATTC
CTGCAACGGC GACAGGAAGC GCGCTTTTCG GCGCTGTCGG TCATAGCGCT TTGGGGAGGC
ATCAGTTTTG TGGGCATCAC GCTCTGGATT CCTCAGAATG TGAACCGCTA CTACCTGCCA
TTAGCGCCGA TCGCCGCACT GCTCCAGGCA TATGGCATCA TTGAAATCAT CAATGTTTAT
CGGGGTAGTC TGCTTTCTAT TTACTCCAAA ATTGGTTTCT CTCTAGGACT TGTGTTAATT
TCCGTCGCAA TAAACTATTA CGAAACAACC TATCCTGCTG CAATAAATTC TTACGAAATA
AATCACCGCT TTTACCCTGC TGCCGAACTC CCTTCCCAAC TCGGGAGAGT CATTGGTAGC
AGCAGAGAGA TTACCAACGA TATGAAAGCC TCTGGTTTCT TGAGTTACGG TCCGTATGCC
AACTTGCCAC CAGGCAGCTA TGTTGCCATA TTTGAATACA AGAGCGATGC ACGTTCTGAC
ACAAGCATTG GATTGGTTGA TGTTACCGCC GACATGGGAA GGACGGTGAT AACACAGCAA
AAGGTGTACG GAACGAATGG GTCTCCGAGT TCTATTGAAA TTCCATTTAT CCTCCAAGAG
AGACAGAAGA TTGAAGTCAG GTTTTGGTAT GACGGAAATG GAACAGGGTC TACTTCTCTG
CGAAGCCTTA CCATTCGTCC CAGATAG
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| Protein sequence | MPRHLLPVVA VTVAGTGTLL VAAPGWVIAG AVFLICGAWL SALAPGRSSG VRPAAPSSIP
SPNPWQHVAL GSIVTIALVS ILVPGIADTE SRYHVDESYW VPVGVQAFRT AFIERDLDHQ
FWFDYLMKFG SPHPQIGKYI IGAGAYLAGY HDVPLLPYDF GQDLAWNKAH GRVLPPEIVG
AARLSVALTG ALCGAFLYWL GVQVAGPVTG ILAVVLFIAT PAVWNLARLA MLDIPALMFG
LLALNLGIRA VTALRTGSAN AGAWIAACGA ACGAAVGAKL NALLIPGICI LAMCLTGVAH
QHQSDRYTLI SGVVSLLLWT WVVFFLSNPM LYPHPVAGIQ HMLDMSRIAA SGEFAPLPTL
ASRISAVWTS LGDGGGIGSG GLPGSRLWLI IGAIFLARAF LQRRQEARFS ALSVIALWGG
ISFVGITLWI PQNVNRYYLP LAPIAALLQA YGIIEIINVY RGSLLSIYSK IGFSLGLVLI
SVAINYYETT YPAAINSYEI NHRFYPAAEL PSQLGRVIGS SREITNDMKA SGFLSYGPYA
NLPPGSYVAI FEYKSDARSD TSIGLVDVTA DMGRTVITQQ KVYGTNGSPS SIEIPFILQE
RQKIEVRFWY DGNGTGSTSL RSLTIRPR
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