Gene RoseRS_1098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1098 
Symbol 
ID5208045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1371053 
End bp1372252 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content63% 
IMG OID640594712 
Productglycosyl transferase, group 1 
Protein accessionYP_001275456 
Protein GI148655251 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000174452 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCGTATTG TCTTTCTCTG CACGTCCAGT CTTGATTATC CGTCGCCGCG CGGACGCTGG 
CTGCCACTGG CGCGCTATCT GGCGCGGGCG GGGCATGAGC CGCATCTGCT GATGCTGCAT
CCAACCTTCG ACCGGTTGCG CAGACGGCGC TTCGTGATCG AGGGGGTGCA TTGTGCGTAT
GTCGGTCAGA TGCATGTGTA TGGTTTGCCC GGTGAGCGAC GGCATTTCAG TGCATCAGAA
CTGGCTGCCG TCTCTCTGCG CGGGGCGCTG GCGCTGGCGC TGGCAACGGT CCGATTGCGC
CCCGACGTTA TCCACGTTGC GAAGCCGCAG CCGATCAATG GGCTTGCCGG GGTGCTGGCG
GCGCAAAGCG GGGGTGCACT GTATGTTGAT TGCGATGACT ACGAAGCCGA GGCGAATCGT
TTCGGCAGCG CATGGCAGCA ACGAGTAGTA GCGTGGTGGG AAGATCAGTT GCCGCGCATG
GCGCGCGGGG TGAGTGTCAA TACCCGCTTC CTCTATAACC GCCTGCATCG TCTGGGCATC
CCTGAACAAC GGCTACGCTA CGTTCCAAAT GGAGTAGACA TAGAACGCTG CGAGCCGCAT
GATGCACGCC GGGTCAGAGC GTTGCGCGCT GCGCTTGGAC TGACCGACAA CCCGACGGCA
GTCTATCTTG GAGCGATCAG CGCTGTCGCG CACGGTGTGC ATCTGCTGAT CGATGCCTGG
ACGCTCCTCC GCGAACGGAT GCCGTCTGCT CGCCTGGTGA TCATCGGCGA TGGCGATGAT
CGTCCGGCAC TGATGACCTA TGCCCGGATG CGTGGTCTGC AGCAGACGGT CATCTGGGCA
GGTCGTGTCC CTGCTGAAGC CGCTCCGGTG TGGCTGGCAG TCGGTGACTG CTCGGTTGAC
CCGGTGGACG ATACCCCTGC CGCAGCAGCG CGTTCGCCGC TCAAGATCGT CGAGAGCATG
GCGGCAGGCG TGCCAGTTGT AACCGGTGAT GTCGGCGACC GGCGCGATAT GCTTGGATGC
AATGCCGGGT TGATCGTCTC CCCTGGCGAT CCGCACGCGC TGGCGGACGG AATTGCGACG
CTGCTGAGCG ACTCTGCGCG ACGCGCTCGT CTGGCGCGAG GGGCGCGTGC ACGGGCGGAG
AGGTACCGCT GGGATCGTCT TGCGGAGGTC TGGCAAACCC TCTACGAGAT CAGTGCATAA
 
Protein sequence
MRIVFLCTSS LDYPSPRGRW LPLARYLARA GHEPHLLMLH PTFDRLRRRR FVIEGVHCAY 
VGQMHVYGLP GERRHFSASE LAAVSLRGAL ALALATVRLR PDVIHVAKPQ PINGLAGVLA
AQSGGALYVD CDDYEAEANR FGSAWQQRVV AWWEDQLPRM ARGVSVNTRF LYNRLHRLGI
PEQRLRYVPN GVDIERCEPH DARRVRALRA ALGLTDNPTA VYLGAISAVA HGVHLLIDAW
TLLRERMPSA RLVIIGDGDD RPALMTYARM RGLQQTVIWA GRVPAEAAPV WLAVGDCSVD
PVDDTPAAAA RSPLKIVESM AAGVPVVTGD VGDRRDMLGC NAGLIVSPGD PHALADGIAT
LLSDSARRAR LARGARARAE RYRWDRLAEV WQTLYEISA