Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1096 |
Symbol | |
ID | 5208043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1363861 |
End bp | 1365669 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640594710 |
Product | hypothetical protein |
Protein accession | YP_001275454 |
Protein GI | 148655249 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00809293 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCTCAA CATCACTGTT TCGCATCGGT CATATCCTGC CGGTTCTTGT TATCGTCGCA CTGATCGCGC CTGCGGTCAC GCCGCCGTCC GAGTCTTCGC TCGCGGTCGC GGAAACGCCG CGTCTGATGT CGAACGACTC TCCCTTCGGG ATCAACTCAC ATCTGGCAAC CCGCTACTGG GATCCCGCCT CGATGTCCAT CCCGGCAGAT GTCGTGGCGC GTCTGGGGGT CGGTTGGGCG CGCGAAGATG TCCACTGGTT TCGCATTCAG CCAACACCCG ATGCGCCCTA CGACTGGACG TACACCGATG AAGCGGTACG CGCACTCAGT CGGCGCGGCG TGAATATTCT CGGCGTCATC GGGCATCCGC CCGGCTGGGC GACACCATTC CCCGGTGATG CGCCGCACGG CGTTTCGTTC TATGCCCCCG ATCCGCAGCG GTTTGCCGCC TTCGCCGCCG CTGTCGCGCA ACGGTACCGC AACTACATCT CTCACTGGGA GATCTGGAAC GAGCCGGATA ATCCGCTCTT CTGGAAACCC GCCCCCGACC CCGCAGCATA CGCAACGCTG CTGCGCCTGT CGGCTGCTGC GATCCGCTCG GTCAACCCGC AGGCAACCAT CCTGATCGGC GGGGTGTACT CGTTCGAGCC ATCCTTTTTG CGTCAGGTAG CGGAAGCCGG CGCCTGGTCG AGTTTTGACA TTCTCGCCAT TCATCCCTAT GTCAGCCCAA GCGCGCCTGA GATCGGGAAC CTGATCGCCG GGGTTGAAGC GGCGCGCGCC GTCGCCGAAC GGTACGGCGC GCGTCCGATC TGGGTCACCG AGATCGGATG GTCGAGCGGG CGCGGCGACC GCGATCCGGT CGGCGTGGTC AACGAGCAGG ATCAGGCAAA CTTTCTGGTG CGGGCGACCC TGCTCCTCTG GCGCGCCGGG GTCGAAAAAA TCTTCTGGTA CACCCTCAAG GATGATCCCG GCAATCCCTA TGGACTGGTC GATTTCGGAT CTGGCTACTT CGACTACAGC CGCCTGAAGC CGTCGTTTAC GGCATACCGG GTCATGACGG AATATCTCGC CGGTGCAGAA CTGGTGGTGG TACGCGACCT GTTCGACCGA TCATCGGTGA TCGATTTCGA GAACTTTGGT TCCTGGCGAC GCGGCGATCA GACCTATGGC GACTTCGCGC CGACCGGCGA ACGGATGCGC AGCGGGCGCG GCGCTGCACA ACTCCGCTAT TTCTTCCCTT CCCGCGCAAA TGAGTACGTC GTTTTCCGGC GCGAACGTCC CATACCTGTT CCTGATGGCA CATATGCGTT AGGTGTATGG GTCTATGGCG ATGGCTCCGG GAACACGCTG AAAGTCTGGA TCCGCGATGC TGAGGGAGAA GTGTTGCAGT TTGCCCTGGG CGCGGTCGGA CCACCCGGAT GGCGCATTCT GGAAGCGCCG ATCGGCGGAA CTGTGCCACC CTGGGATCGG ATCAGTGGCG ATGGCAACGG ACGGATCGAC GCTCCGGCGC GACTCGACGC AATCGTGCTT GATGATGCCC CTGATGCGTT CGTCGGCGGC GGAACGATCT ACCTGGACGA CATGTTCGCC ATCAGCGGAC CGGAAGCCTA CGATGCGCAG TTCCGGCGCG GCGACATCGC CATCGATGTC TTGTGGGCGC CTGCGCCGGT ACGCGCCAGC ATCAGCACCA GTGCATCCAC TGCCGCGCTG ATCACACGCG ACGGCGCCAC AGCGACGATT GTCGCCAGCG ATGGGCGCCT GGTCATTGAT CTCGGTCCGG CGCCGGTGTA TGTGGTTCAC CGGCGCTGA
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Protein sequence | MRSTSLFRIG HILPVLVIVA LIAPAVTPPS ESSLAVAETP RLMSNDSPFG INSHLATRYW DPASMSIPAD VVARLGVGWA REDVHWFRIQ PTPDAPYDWT YTDEAVRALS RRGVNILGVI GHPPGWATPF PGDAPHGVSF YAPDPQRFAA FAAAVAQRYR NYISHWEIWN EPDNPLFWKP APDPAAYATL LRLSAAAIRS VNPQATILIG GVYSFEPSFL RQVAEAGAWS SFDILAIHPY VSPSAPEIGN LIAGVEAARA VAERYGARPI WVTEIGWSSG RGDRDPVGVV NEQDQANFLV RATLLLWRAG VEKIFWYTLK DDPGNPYGLV DFGSGYFDYS RLKPSFTAYR VMTEYLAGAE LVVVRDLFDR SSVIDFENFG SWRRGDQTYG DFAPTGERMR SGRGAAQLRY FFPSRANEYV VFRRERPIPV PDGTYALGVW VYGDGSGNTL KVWIRDAEGE VLQFALGAVG PPGWRILEAP IGGTVPPWDR ISGDGNGRID APARLDAIVL DDAPDAFVGG GTIYLDDMFA ISGPEAYDAQ FRRGDIAIDV LWAPAPVRAS ISTSASTAAL ITRDGATATI VASDGRLVID LGPAPVYVVH RR
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