Gene RoseRS_1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1096 
Symbol 
ID5208043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1363861 
End bp1365669 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content63% 
IMG OID640594710 
Producthypothetical protein 
Protein accessionYP_001275454 
Protein GI148655249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00809293 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCTCAA CATCACTGTT TCGCATCGGT CATATCCTGC CGGTTCTTGT TATCGTCGCA 
CTGATCGCGC CTGCGGTCAC GCCGCCGTCC GAGTCTTCGC TCGCGGTCGC GGAAACGCCG
CGTCTGATGT CGAACGACTC TCCCTTCGGG ATCAACTCAC ATCTGGCAAC CCGCTACTGG
GATCCCGCCT CGATGTCCAT CCCGGCAGAT GTCGTGGCGC GTCTGGGGGT CGGTTGGGCG
CGCGAAGATG TCCACTGGTT TCGCATTCAG CCAACACCCG ATGCGCCCTA CGACTGGACG
TACACCGATG AAGCGGTACG CGCACTCAGT CGGCGCGGCG TGAATATTCT CGGCGTCATC
GGGCATCCGC CCGGCTGGGC GACACCATTC CCCGGTGATG CGCCGCACGG CGTTTCGTTC
TATGCCCCCG ATCCGCAGCG GTTTGCCGCC TTCGCCGCCG CTGTCGCGCA ACGGTACCGC
AACTACATCT CTCACTGGGA GATCTGGAAC GAGCCGGATA ATCCGCTCTT CTGGAAACCC
GCCCCCGACC CCGCAGCATA CGCAACGCTG CTGCGCCTGT CGGCTGCTGC GATCCGCTCG
GTCAACCCGC AGGCAACCAT CCTGATCGGC GGGGTGTACT CGTTCGAGCC ATCCTTTTTG
CGTCAGGTAG CGGAAGCCGG CGCCTGGTCG AGTTTTGACA TTCTCGCCAT TCATCCCTAT
GTCAGCCCAA GCGCGCCTGA GATCGGGAAC CTGATCGCCG GGGTTGAAGC GGCGCGCGCC
GTCGCCGAAC GGTACGGCGC GCGTCCGATC TGGGTCACCG AGATCGGATG GTCGAGCGGG
CGCGGCGACC GCGATCCGGT CGGCGTGGTC AACGAGCAGG ATCAGGCAAA CTTTCTGGTG
CGGGCGACCC TGCTCCTCTG GCGCGCCGGG GTCGAAAAAA TCTTCTGGTA CACCCTCAAG
GATGATCCCG GCAATCCCTA TGGACTGGTC GATTTCGGAT CTGGCTACTT CGACTACAGC
CGCCTGAAGC CGTCGTTTAC GGCATACCGG GTCATGACGG AATATCTCGC CGGTGCAGAA
CTGGTGGTGG TACGCGACCT GTTCGACCGA TCATCGGTGA TCGATTTCGA GAACTTTGGT
TCCTGGCGAC GCGGCGATCA GACCTATGGC GACTTCGCGC CGACCGGCGA ACGGATGCGC
AGCGGGCGCG GCGCTGCACA ACTCCGCTAT TTCTTCCCTT CCCGCGCAAA TGAGTACGTC
GTTTTCCGGC GCGAACGTCC CATACCTGTT CCTGATGGCA CATATGCGTT AGGTGTATGG
GTCTATGGCG ATGGCTCCGG GAACACGCTG AAAGTCTGGA TCCGCGATGC TGAGGGAGAA
GTGTTGCAGT TTGCCCTGGG CGCGGTCGGA CCACCCGGAT GGCGCATTCT GGAAGCGCCG
ATCGGCGGAA CTGTGCCACC CTGGGATCGG ATCAGTGGCG ATGGCAACGG ACGGATCGAC
GCTCCGGCGC GACTCGACGC AATCGTGCTT GATGATGCCC CTGATGCGTT CGTCGGCGGC
GGAACGATCT ACCTGGACGA CATGTTCGCC ATCAGCGGAC CGGAAGCCTA CGATGCGCAG
TTCCGGCGCG GCGACATCGC CATCGATGTC TTGTGGGCGC CTGCGCCGGT ACGCGCCAGC
ATCAGCACCA GTGCATCCAC TGCCGCGCTG ATCACACGCG ACGGCGCCAC AGCGACGATT
GTCGCCAGCG ATGGGCGCCT GGTCATTGAT CTCGGTCCGG CGCCGGTGTA TGTGGTTCAC
CGGCGCTGA
 
Protein sequence
MRSTSLFRIG HILPVLVIVA LIAPAVTPPS ESSLAVAETP RLMSNDSPFG INSHLATRYW 
DPASMSIPAD VVARLGVGWA REDVHWFRIQ PTPDAPYDWT YTDEAVRALS RRGVNILGVI
GHPPGWATPF PGDAPHGVSF YAPDPQRFAA FAAAVAQRYR NYISHWEIWN EPDNPLFWKP
APDPAAYATL LRLSAAAIRS VNPQATILIG GVYSFEPSFL RQVAEAGAWS SFDILAIHPY
VSPSAPEIGN LIAGVEAARA VAERYGARPI WVTEIGWSSG RGDRDPVGVV NEQDQANFLV
RATLLLWRAG VEKIFWYTLK DDPGNPYGLV DFGSGYFDYS RLKPSFTAYR VMTEYLAGAE
LVVVRDLFDR SSVIDFENFG SWRRGDQTYG DFAPTGERMR SGRGAAQLRY FFPSRANEYV
VFRRERPIPV PDGTYALGVW VYGDGSGNTL KVWIRDAEGE VLQFALGAVG PPGWRILEAP
IGGTVPPWDR ISGDGNGRID APARLDAIVL DDAPDAFVGG GTIYLDDMFA ISGPEAYDAQ
FRRGDIAIDV LWAPAPVRAS ISTSASTAAL ITRDGATATI VASDGRLVID LGPAPVYVVH
RR