| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1032 |
|---|
| Symbol | |
|---|
| ID | 5207978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 1270784 |
|---|
| End bp | 1271500 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640594646 |
|---|
| Product | translation initiation factor IF-3 |
|---|
| Protein accession | YP_001275391 |
|---|
| Protein GI | 148655186 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
|---|
| TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.82167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTATACT TACCTTCACA TCGCGTCTTT TCGGCGCGGT TTGTTTTCTG TTGCTGTCAC
GATTTTGAAA GGAGCGCTGC AATTAGAGAC CGGCTTCGTA TCAACAATCG CATTCGCGCC
CGCGAAGTGC GCTTGATTGA TGAAAACGGC GCGCAGATCG GCATTGTGTC GATCCGCGAC
GCGCTATCCA TGGCGGAAGA GCGCGGGCTT GATCTGGTCG AAGTTGCGCC AAACGCCGTC
CCGCCCGTCT GTCGCATTCT GGATTACGGC AAATTTCGCT ACGAGCAATC GAAGAAAGAG
CGCGAGGCGC GCAAGAACCA GAAGCAGGTG GAGGTCAAGC AGATCCGACT GGAACCGAAG
ACTGATGATC ACGATCTTGA AGTCAAAGCC AAACAGGCGC GGCGATTTCT CCTGGAAGGC
GACAAAGTCA AGTTCAATCT GCGGTTCCGC GGGCGCGAGA TCTTTCATCA GGAGATTGGG
CTGGAAATGC TGGAACGCAT GGCGGAGGAA CTGCGCGACA TCTCGGTCGT CGAGCAGCGG
CCAACGATGG AAGGGCGCGT GTTGACATTA TTACTTGCGC CGAATCAGAA AGCCAAAACG
CAGGCGCAGC GCGAACGGCA GCAGCAGACA TCTCGCAGTA CAACGTCATC GGTAGCGAAG
GTCAGCGCGC CCGCGTCTGA TGCAGCGCCC GACGATCAGG CTGACGAAGA GGATTGA
|
|---|
| Protein sequence | MLYLPSHRVF SARFVFCCCH DFERSAAIRD RLRINNRIRA REVRLIDENG AQIGIVSIRD
ALSMAEERGL DLVEVAPNAV PPVCRILDYG KFRYEQSKKE REARKNQKQV EVKQIRLEPK
TDDHDLEVKA KQARRFLLEG DKVKFNLRFR GREIFHQEIG LEMLERMAEE LRDISVVEQR
PTMEGRVLTL LLAPNQKAKT QAQRERQQQT SRSTTSSVAK VSAPASDAAP DDQADEED
|
|---|
| |