Gene RoseRS_0958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0958 
Symbol 
ID5207904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1182024 
End bp1183337 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content61% 
IMG OID640594572 
Productelectron-transferring-flavoprotein dehydrogenase 
Protein accessionYP_001275317 
Protein GI148655112 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGGC TCACCTTTGA TGCAATTGTC GTCGGCGCCG GACCGGCAGG TGTTGCGGCG 
GCGCTGACAA TGGCGCGCGG CGGGTTGAAG GTGATCATCA TCGAACGCGG GCGATTTGCC
GGCGCCAAGA ACCTTTTCGG CGGCGTCTTC TACACCCACG CGCTGGCGGA TGTTCTGCCG
GATTACTGGG AACGCAAGCC GCCGTTCGAG CGCCCGGTCA CCGAGCAGGG ATACTGGATG
CTCTCGCCAG ATAGTGTGAT CCGGGTGATG CACAAGAGCG AACGTTACCG GAAGGAACCG
GCTGATGCCT ATACTGTTCT GCGCGCGCGT TTTGATCCCT GGTTTGCCGA ACAGGCGGTG
CAGGCGGGTG CGCTGCTCAT CACGCGCACA ACCGTCACCC GGTTGTTGAA AGACGAGCGG
GGGCGGGTTA TCGGCGTCGA TACCGACCGC CCTGAAGGAA GCGTCTACGC ACCGGTCGTG
ATCATCGCCG AAGGGGTCAA CAATCTGCTG ACCCGACAGG CGGGACTGAT CGCGTCGGAT
CTGCCGCCGA CGCATGTTGC GCTGGCAGTC AAGGAATACG TCAACCTGCC GGCAAAAGAA
CTTCAGGCGC GCTTCGGGTT GAGCGGTCCG CGCGAAGGGG TGGCGATCGA TGTGTTTGGC
GATGTCACCC TGGGGCTGCC GGGAACCGGT TTTATCTACA CCGATCAATC CGGCATTTCG
ATCGGGGTTG GCATGCTGCT CGATGAATTC ATCACGCACC GCTTGCGCCC CTACCAGGTT
CTGGAGCGCT TCAAGAATCA CCCGGTCGTT CGTCCCTACC TGGAAGGGGG AGAGGTGCGC
GAATATGGAG CGCACCTGAT CCCGGAGATG GGGTACGACC GTATGCCAAA ACTGGCGGGT
GACGGCGTGA TGGTGGCAGG GGACGCCGCC GGGATGGTCG ATGCGCTGCA CCGCGAAGGG
ACGAACCTGG CGATCACGGC TGGCAAAGCA GCCGGGGAAA CCGCACTGGC AGCGCATCAG
CAGGGCGATT TCTCGGCGGC TTTCCTGAAC CGGTACCGGC GCACGCTGGA AGACAGTTTC
GTGTTGAAAG ACATGAAGCA GTACCGGCGC ATGACCGATT TTCTCGAGAG TTCGCCGCAG
TTCATGGGCA CCTACGTCAA TCTGCTCAAT GAGGCGGCGC TGCGCTATTT TACGGCTCAT
GGCATTCCCA AGCGGGAAAT GGAACACGAC ATTCTCAAGA TGGTTCGTGA ACGCCGCTCG
TTCACCGGCG TCGCGTGGGA TATGCTGAAA TTGATGCGTG CAATGCGAGG TTAG
 
Protein sequence
MGRLTFDAIV VGAGPAGVAA ALTMARGGLK VIIIERGRFA GAKNLFGGVF YTHALADVLP 
DYWERKPPFE RPVTEQGYWM LSPDSVIRVM HKSERYRKEP ADAYTVLRAR FDPWFAEQAV
QAGALLITRT TVTRLLKDER GRVIGVDTDR PEGSVYAPVV IIAEGVNNLL TRQAGLIASD
LPPTHVALAV KEYVNLPAKE LQARFGLSGP REGVAIDVFG DVTLGLPGTG FIYTDQSGIS
IGVGMLLDEF ITHRLRPYQV LERFKNHPVV RPYLEGGEVR EYGAHLIPEM GYDRMPKLAG
DGVMVAGDAA GMVDALHREG TNLAITAGKA AGETALAAHQ QGDFSAAFLN RYRRTLEDSF
VLKDMKQYRR MTDFLESSPQ FMGTYVNLLN EAALRYFTAH GIPKREMEHD ILKMVRERRS
FTGVAWDMLK LMRAMRG