| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0913 |
|---|
| Symbol | |
|---|
| ID | 5207859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 1127656 |
|---|
| End bp | 1128072 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640594527 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_001275272 |
|---|
| Protein GI | 148655067 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0346302 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGCA ACATTCTTGT CGCTGTTGAC GGCTCACCCT TGTCGTCGCG GGCAATCGAC
GTAGCAGTCG ATATTGCAAG GCATTACAAC GCAAAACTGT GTCTGCTCCA TGCATTCCCG
CACGTTTCCG ATCTTCTTGG GACACCCGAA TACGAACGCC TGCTCGAAAC GCGCATGCTG
ATCGGTCAGT CGCTGATCGA GGCTGCGCGC ACCCAGGTGG GCGATCAGGT GGAGGTTGAT
GTGCAGTTGC TGGAAGGACC GCCCGCACAG GCGATCCTGC GCGTCGCGGA GGAGGAGAAC
TTCGATCTTA TCGTGATGGG ATCACGCGGG CACAGTCCGC TCGTTGGTCT GCTCCTGGGC
AGCGTGAGCA GCACCGTCGC GCAGCGGGCG CGCTGTCCGG TCTTGATTGT TCACTAG
|
|---|
| Protein sequence | MFRNILVAVD GSPLSSRAID VAVDIARHYN AKLCLLHAFP HVSDLLGTPE YERLLETRML
IGQSLIEAAR TQVGDQVEVD VQLLEGPPAQ AILRVAEEEN FDLIVMGSRG HSPLVGLLLG
SVSSTVAQRA RCPVLIVH
|
|---|
| |