| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0864 |
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| Symbol | |
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| ID | 5207810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1078699 |
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| End bp | 1079748 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640594482 |
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| Product | nifR3 family TIM-barrel protein |
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| Protein accession | YP_001275227 |
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| Protein GI | 148655022 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGA TTCCACGAAA GCCAGATGGT TCATTGCAGT CTATGAACGA CAACCTTCCA
ACGAAGTACC AGATCAGGCA TATCACCATC GAGCCGAACA TTGTGCTGGC GCCGATGGTT
GGCGTCACCG ATAGCATCTT CCGCCGCATG ATCCTCAGCC TGGGCGGATG CGGATTGGTG
TGCAGCGAAA TGACCAGCGC CTCGGCGGTC AGTCCGCGCG CGCGCAGCCG CCATCGCCAG
CTCGACTATC TGCCCGAAGA ACGCCCGATC GCTATGCAAC TGAGCGGCAA TGATCCAGAC
CTGGTTGCGG CGGCTGCGCG CGTCGTCGAA GAACTCGGCG CCGATATTCT CGACATCAAC
TGTGGATGCC CATCGCCAAA AGTGACTGGG GGCGGGCACG GTTCGGCGCT GCTGCGCGAC
CTGCCGACAA TGGAACGACT GTTGAAGGCA GTCTGCGCTG CGGTGCAGAT CCCGGTGACC
CTCAAGTTTC GCGCCGGGTG GGACGAAGCG AGCCTGAACT ACCTGGATAC GGCAAAAATG
GCGGAGCAGG CTGGCGTGGC GGCGCTGGCG CTCCATCCGC GCACGCGCGC CCAGGGGTAC
AGCGGTGTCG CCGACTGGAC GCGGGTCGCC GAAGTCAAGC GCGCTGTCAG CATTCCCGTC
ATCGGATCAG GGGATGTTCG TGATGCCGCC GATGCGCTTC GCCGTCTGCA TGAAAGCGGC
GCCGACGGTG TTATGATCGG GCGCGGCGCG ATGCATAATC CGTGGATCTT CCGACAGATT
GCTCAATTGC GTACAGGAAT GCAACCGATG ACGGTCACAC CCGCCGACAA ATATGATTTT
CTGACGCGCT ATCTGGAGAT GTGTTGCGAC GAAATGCCCG AACGCCTGGC GCTGAACAAG
TTGAAACAGT TGATTGGACA GTTTGGCATT GAACTGCCCG GCGCAGCCGC ACTGCGCAGC
GCAGTGCACC ACTCGTCCAG CGTCGCCGAA GCGCGCGACC ATCTCGAGCG TTTCTTTGCC
TGGCATATCG AGGCGATGGC AGTCGGTTGA
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| Protein sequence | MSTIPRKPDG SLQSMNDNLP TKYQIRHITI EPNIVLAPMV GVTDSIFRRM ILSLGGCGLV
CSEMTSASAV SPRARSRHRQ LDYLPEERPI AMQLSGNDPD LVAAAARVVE ELGADILDIN
CGCPSPKVTG GGHGSALLRD LPTMERLLKA VCAAVQIPVT LKFRAGWDEA SLNYLDTAKM
AEQAGVAALA LHPRTRAQGY SGVADWTRVA EVKRAVSIPV IGSGDVRDAA DALRRLHESG
ADGVMIGRGA MHNPWIFRQI AQLRTGMQPM TVTPADKYDF LTRYLEMCCD EMPERLALNK
LKQLIGQFGI ELPGAAALRS AVHHSSSVAE ARDHLERFFA WHIEAMAVG
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