| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0858 |
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| Symbol | |
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| ID | 5207804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1070675 |
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| End bp | 1071898 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640594476 |
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| Product | ABC transporter related |
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| Protein accession | YP_001275221 |
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| Protein GI | 148655016 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.166623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCGG TGATCGAGTT CGACAACGTC TCGAAACGTT TTCTGCTCCA GCATGAGCGC
CATACCACCA TACGCGAGCG TCTATTCGGG GTCTTTCGTC CGCGTACACC ACGGGATGAA
TTCTGGGCGC TGCGCAATGT CAGTTTTACA GTGGCGCGCG GCGAAAGTTT TGGGCTGATC
GGTCACAACG GTGCCGGGAA AAGCACGGCG CTCAAGTTGA TGACACGCAT CCTCGAGCCG
ACATCGGGGC AGGTGCGATT GCGGGGGAGG GTTGCTGCCC TGCTCGAACT CGGCAGCGGT
TTCCACCCCG AATTGAGCGG ACGGGACAAT GTGTTTCTCT ACGGTTCGCT CATGGGTCTT
AGCCGACGCG AGATGGCCGC ACGGCTGGAT GCGATCGTCG CATTCGCCGG GATGGAAGAT
TTTCTCGATC TGCCGGTCAA GCATTACTCC TCCGGTATGT ACACGCGCCT GGCGTTTGCC
GTGGCAACGG CGGTAGACCC CGACATTCTG ATCACAGATG AAGTGCTGGC GGTTGGCGAC
GAGGCGTTCC AGCGTAAATG CATGGATCGC ATCCTGAGGT TTCGTCACGC CGGGAAAACG
ATCATTTTCG TTTCGCACGC ACTCGACACG GTGCGCACCC TGTGTGATCG CGCAGTGTGG
CTTGATCGGG GCGTCGTCCG TGCGATCGGC GCAAGCGGGG AGGTGATCGA CGCCTATCTT
GCCGATGTAA ACCAGCGTGA ACACGCATCG TCGGCACAGA TGGATGCACC GGGCATTGAC
CCGACACGCC GTTTCGGGTC AGGCGAAGTC GAAATCATCG GTGTGGAACT GCTCGATGCG
CAAGGCGGTG GGGGCGCGAT TGCCCGCACC GGTGCGCCGG TGACGTTCCG AATCCGGTAT
CGCGCCCATC AAACTGTGCC GCAACCGGTA TTCGGGCTGG CGATCCATCA CGAAAGCGGT
ACGCTTCTGG CGGGACCGAA TACCCTGTTT GCCGGACTGG ACATTCCTGC GGTGCGTGGT
GAGGGAAGAG TTGATATGCA CGTGGCAGCG TTGCCGTTGC TGGCGGGGCG GTACCTCCTC
AGTGCAGCAG TGTATGACAA GACAATGCTG TTTCCCTACG ATCATCATGA CCGCATTTAT
CACTTTGCCG TGCATAACGA AGGGGGAAGC GAACGATTTG GCGCTTGCGT TTTAGGCAGT
CGCTGGTCAT GGCACGAGGA GTGA
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| Protein sequence | MSAVIEFDNV SKRFLLQHER HTTIRERLFG VFRPRTPRDE FWALRNVSFT VARGESFGLI
GHNGAGKSTA LKLMTRILEP TSGQVRLRGR VAALLELGSG FHPELSGRDN VFLYGSLMGL
SRREMAARLD AIVAFAGMED FLDLPVKHYS SGMYTRLAFA VATAVDPDIL ITDEVLAVGD
EAFQRKCMDR ILRFRHAGKT IIFVSHALDT VRTLCDRAVW LDRGVVRAIG ASGEVIDAYL
ADVNQREHAS SAQMDAPGID PTRRFGSGEV EIIGVELLDA QGGGGAIART GAPVTFRIRY
RAHQTVPQPV FGLAIHHESG TLLAGPNTLF AGLDIPAVRG EGRVDMHVAA LPLLAGRYLL
SAAVYDKTML FPYDHHDRIY HFAVHNEGGS ERFGACVLGS RWSWHEE
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