Gene RoseRS_0842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0842 
Symbol 
ID5207786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1044138 
End bp1045337 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content62% 
IMG OID640594458 
Productacetylornithine and succinylornithine aminotransferase 
Protein accessionYP_001275205 
Protein GI148655000 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR00707] acetylornithine and succinylornithine aminotransferases 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0215856 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG CTGACGTCAT TTCTGCCGAA CAACGTTACC TGCTGCAAAC CTATGCGCGA 
CCGGAATTCG TCATTGAGCG CGGCGAAGGA TGCTATCTCT ACGATAGTGA AGGTCGTCGC
TACCTGGACT GTGTTGCCGG TATTGCGGTC AACGCGCTCG GCTACGGCGA TCCCGACGTT
GCGCGCGCAA TCAGGGATCA CGCCAACGGA CTGATCCATC TGTCGAACCT GTACCACTCG
CGTCCGGCGG TCGAACTGGC GCAGACGCTG GTCAATCATA CATCGTGGGC GGATCGGGTC
TTCTTCTGCA ACAGCGGCGC AGAGGCGGTC GAGGGTGCGC TAAAGTTCAG CCGCCGCTAT
GCGCGTGACA TCCACGGCGA AGGGAAGACG ACGATTGTGG CATTCAGCGG CTCATTCCAC
GGGCGCACGA TGGGCGCCGT GGCGGTGACG GCGCGCGAAA AGTATCGTCA ACCGTTCGAA
CCGGTGATGC CAGGGGTGCG TTTTATCCCC TTCAACGATA GCGCTGCCGC AGCTGCCGCC
ATTACCGACG ATGTGTGCGG CGTGATCGTC GAACCAATAC AGGGGGAGGG TGGTCTCAGC
GTAGCGACGC CGGAGTTCCT GCGTGCGCTG CGTGAACGGT GCGACGCAGT CGATGCGCTG
CTCATCTTCG ACGAAATCCA GTGCGGTATC GGACGCACCG GAACGCTGTG GGCGCATGAA
CCGTATGGCG TGGCGCCCGA TCTGATGACG ATCGCCAAAC CCCTCGGCGG GGGGCTGCCG
ATCGGCGCGA TCCTGATGCG CCAGAAAGTT GCGCAGGCGA TCCACACTGG CGATCACGGA
ACGACGTTTG GCGGCGGTCC GTTCGTTACC GCAGTCGCGC AAACGGTGTT CCGCAAAATC
GCCGATCCGA CGTTCCTCGC CCATGTGCGC GAAGTCGGTG ACTACCTCGG CGAGGCGCTG
GCTGACCTGC AGGCTGCCCG CCCCAATGTT GTGCTGGAAG TGCGCGGACG TGGTCTGATG
CGCGGCGTGG TGATCAATGG TTCTTCCAGC GCGGTGCGCG AAGCAGCGCA CAATGAAGGT
CTCCTGATCG CCACTGCCGG TGATGATGTG TTGCGCCTGG TACCGCCCCT GATCCTGACC
CGCGCTCAGG TCGATGAAGC CATCGAGAAA CTGACCAGAG CGCTGGACGC CGCATCCTGA
 
Protein sequence
MTAADVISAE QRYLLQTYAR PEFVIERGEG CYLYDSEGRR YLDCVAGIAV NALGYGDPDV 
ARAIRDHANG LIHLSNLYHS RPAVELAQTL VNHTSWADRV FFCNSGAEAV EGALKFSRRY
ARDIHGEGKT TIVAFSGSFH GRTMGAVAVT AREKYRQPFE PVMPGVRFIP FNDSAAAAAA
ITDDVCGVIV EPIQGEGGLS VATPEFLRAL RERCDAVDAL LIFDEIQCGI GRTGTLWAHE
PYGVAPDLMT IAKPLGGGLP IGAILMRQKV AQAIHTGDHG TTFGGGPFVT AVAQTVFRKI
ADPTFLAHVR EVGDYLGEAL ADLQAARPNV VLEVRGRGLM RGVVINGSSS AVREAAHNEG
LLIATAGDDV LRLVPPLILT RAQVDEAIEK LTRALDAAS