Gene RoseRS_0836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0836 
Symbol 
ID5207780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1037790 
End bp1038584 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content46% 
IMG OID640594453 
Producthypothetical protein 
Protein accessionYP_001275200 
Protein GI148654995 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00236993 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000189313 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
TTGAGCAAAA CCACGAACAG GTTACTCAAA TTTGTTGGCT ACATACTTGA TTATGCGCCC 
ATTATCGCCA CAGTAATCGT GGCAACATTG GCATCTCTTT CAGCCGTGCG AAGTGGTATA
ACCACCGCCG AGATGTTGCA ATGGGTGCTT GTAGTATTGG CTTTGCTGGC GACGACACAA
CTTGTTGATA GATTTCGATT GATGAGAAAT CTTGATGTTA AAGTCGAGCA ATTGTTGGAA
AGTGCCCAGG GATTGAAAGG AGCAAACGCT TTCTTTGTTC CACGAATCCC CGATATGGAA
GAACGACTAC GCCAAGCAAA GTCTATAGCC ATCAACGGAA TAACGTTGTC TCGTACTAGC
GATTCTTTTT GGGGTACCTT TAAGCAGAGA ATCGCAGAAG GTGCAAGAAT TCGGATTCTA
ATTGTTGATC CTAATCACCA AGCGCTCGAC ATTGCGGTAA ATCGTTTTCA CAAACACCAA
GACCCGAACA GGCTGCGCCG CGAATCAGAA CACGCTCTAG ATAATTTCGA ATCGTTGATG
GCTGAACAGA CTTTGGGCGA AGCCTTTCAA GTGCGTTTGC TCCCATTTGT GCCCCCTTAT
GGCATTTGGC TCATAGACGC GGATACCCCG AGAGCCGAGA TTTGGGTCGA ATTGTACTCA
TTTCGTGATG AACCTGAACC AACCTTCCAT CTTCTTCCAA ATCGTGATGG AGAGTGGTTT
ACTTTCTTTC AACGTCAATT TGAAATAATG TGGAATGCCA GTAAGCAGTG GAAACCTGAG
AAAAACGCCG CCTAA
 
Protein sequence
MSKTTNRLLK FVGYILDYAP IIATVIVATL ASLSAVRSGI TTAEMLQWVL VVLALLATTQ 
LVDRFRLMRN LDVKVEQLLE SAQGLKGANA FFVPRIPDME ERLRQAKSIA INGITLSRTS
DSFWGTFKQR IAEGARIRIL IVDPNHQALD IAVNRFHKHQ DPNRLRRESE HALDNFESLM
AEQTLGEAFQ VRLLPFVPPY GIWLIDADTP RAEIWVELYS FRDEPEPTFH LLPNRDGEWF
TFFQRQFEIM WNASKQWKPE KNAA