Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0836 |
Symbol | |
ID | 5207780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1037790 |
End bp | 1038584 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640594453 |
Product | hypothetical protein |
Protein accession | YP_001275200 |
Protein GI | 148654995 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00236993 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000189313 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | TTGAGCAAAA CCACGAACAG GTTACTCAAA TTTGTTGGCT ACATACTTGA TTATGCGCCC ATTATCGCCA CAGTAATCGT GGCAACATTG GCATCTCTTT CAGCCGTGCG AAGTGGTATA ACCACCGCCG AGATGTTGCA ATGGGTGCTT GTAGTATTGG CTTTGCTGGC GACGACACAA CTTGTTGATA GATTTCGATT GATGAGAAAT CTTGATGTTA AAGTCGAGCA ATTGTTGGAA AGTGCCCAGG GATTGAAAGG AGCAAACGCT TTCTTTGTTC CACGAATCCC CGATATGGAA GAACGACTAC GCCAAGCAAA GTCTATAGCC ATCAACGGAA TAACGTTGTC TCGTACTAGC GATTCTTTTT GGGGTACCTT TAAGCAGAGA ATCGCAGAAG GTGCAAGAAT TCGGATTCTA ATTGTTGATC CTAATCACCA AGCGCTCGAC ATTGCGGTAA ATCGTTTTCA CAAACACCAA GACCCGAACA GGCTGCGCCG CGAATCAGAA CACGCTCTAG ATAATTTCGA ATCGTTGATG GCTGAACAGA CTTTGGGCGA AGCCTTTCAA GTGCGTTTGC TCCCATTTGT GCCCCCTTAT GGCATTTGGC TCATAGACGC GGATACCCCG AGAGCCGAGA TTTGGGTCGA ATTGTACTCA TTTCGTGATG AACCTGAACC AACCTTCCAT CTTCTTCCAA ATCGTGATGG AGAGTGGTTT ACTTTCTTTC AACGTCAATT TGAAATAATG TGGAATGCCA GTAAGCAGTG GAAACCTGAG AAAAACGCCG CCTAA
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Protein sequence | MSKTTNRLLK FVGYILDYAP IIATVIVATL ASLSAVRSGI TTAEMLQWVL VVLALLATTQ LVDRFRLMRN LDVKVEQLLE SAQGLKGANA FFVPRIPDME ERLRQAKSIA INGITLSRTS DSFWGTFKQR IAEGARIRIL IVDPNHQALD IAVNRFHKHQ DPNRLRRESE HALDNFESLM AEQTLGEAFQ VRLLPFVPPY GIWLIDADTP RAEIWVELYS FRDEPEPTFH LLPNRDGEWF TFFQRQFEIM WNASKQWKPE KNAA
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