| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0767 |
|---|
| Symbol | radC |
|---|
| ID | 5207706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 947610 |
|---|
| End bp | 948311 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640594381 |
|---|
| Product | DNA repair protein RadC |
|---|
| Protein accession | YP_001275133 |
|---|
| Protein GI | 148654928 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2003] DNA repair proteins |
|---|
| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.488652 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGT ATCATGTTCG CATTCGCGAA CTTCCGCCGA CCGACAAACC GCGCGAGCGG
TTGCGCTCCA GCGGCGCTGC TGCGCTCGCC GATGCCGAAC TGCTGGCAAT TCTGCTGCGT
GTTGGCATTG AAGGAATGAA CGCCATTCAA CTTGCGCAGC AACTGCTCGT CGAGTTTGGC
GGATGGAATG GTTTGCAGCG TGCTGGCTTC GAGGAACTGG CGCAGCGTCG CGGCATGGGT
GAGGCAAAAA CCGCGCAACT CAAAGCGGCG CTCGAAATCG GTCGCCGGCT ACTGCTGGCA
GGTGGCGACG AACGGTTCCT GATCCGTTCG CCTACCGATG CAGCGCAACT GATGCAGATC
GAAATGAGCC ATCTCGACCA GGAACAGTTA CGCGCGATCT GCCTGGACAC CAAGAATCGC
GTGCAGAAAA TCCAGACGGT CTATATCGGC AGTCTGCACA CATCGATGGT TCGGATTGGC
GAAATCTTCA AGGAACCCAT CCGGTTGAAC TCAGCGTCGA TTATCGTTGT ACACAACCAT
CCAAGCGGTG ACCCAACCCC TTCGCCGGAG GATGTTGTCG TAACCCGTCA GATCATCGAA
GCCGGACGGT TGCTCGATAT TGATGTGCTC GATCATCTGG TGATTGGGGC GGGTCGATTC
GTCAGCATGC GCGAACGTGG GTTGGGGTTT GGAAAGCCTT GA
|
|---|
| Protein sequence | MTEYHVRIRE LPPTDKPRER LRSSGAAALA DAELLAILLR VGIEGMNAIQ LAQQLLVEFG
GWNGLQRAGF EELAQRRGMG EAKTAQLKAA LEIGRRLLLA GGDERFLIRS PTDAAQLMQI
EMSHLDQEQL RAICLDTKNR VQKIQTVYIG SLHTSMVRIG EIFKEPIRLN SASIIVVHNH
PSGDPTPSPE DVVVTRQIIE AGRLLDIDVL DHLVIGAGRF VSMRERGLGF GKP
|
|---|
| |