Gene RoseRS_0714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0714 
Symbol 
ID5207653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp885704 
End bp886081 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content52% 
IMG OID640594328 
Producthypothetical protein 
Protein accessionYP_001275080 
Protein GI148654875 
COG category[S] Function unknown 
COG ID[COG2929] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0074508 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCCA CGTCTCGTCT GAAGGTCGCG TATGCTATCA TATACCTGGC ACGAAGCGAA 
TGCGCAGGCT GTTGCGTGAT GGATGTTGTC TATCGACTCC AGGGTGTCGA ATTTGAGTGG
GATGACCAGA AGTCCCGACT CAACATCGTC AACCACGGCG TAACCTTTGA GGAAGCTGCC
GAGGTCTTTT TTGATCCATT CTATCAATAT GGAGATGCTA CTCCAAACGA TGTCAACGAG
CAGCGCAATT TTGTCCTGGG CTACCCGGTC GCGCAACGCT TATTGCTGGT TGTCTACACC
GAGCGACGCG AGCGAACGCG GATTATCTCT GCACGATTGG CAACGCGCGC AGAAAGGAAA
CTCTATGAGT CAGCCTGA
 
Protein sequence
MLATSRLKVA YAIIYLARSE CAGCCVMDVV YRLQGVEFEW DDQKSRLNIV NHGVTFEEAA 
EVFFDPFYQY GDATPNDVNE QRNFVLGYPV AQRLLLVVYT ERRERTRIIS ARLATRAERK
LYESA