Gene RoseRS_0709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0709 
Symbol 
ID5207648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp880936 
End bp882153 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content61% 
IMG OID640594323 
ProductFeS assembly protein SufD 
Protein accessionYP_001275075 
Protein GI148654870 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01981] FeS assembly protein SufD, group 1 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTATGA AAACGTTTCC TCCGCTTGCC GAAATCAGCG ACGCCCTGGT GATCGAGCGA 
TCGCGCGCAG CCGGTGAACC GGAGTGGCTC ACGGAGCAGC GCGTGGATGC GTGGCGGTTC
TTCGCCTCCG CCGAACCGCC GTACTGGCGT CGCACCGATC TGTCGAAGTT CAAGCCGGAA
CAGGTGATTG CTGCTGCCGA TACTGCTGCC ACCAGCCTGT ATCAGGAAGA AGACCTGACG
GATCAGGGGG TGGTGTTTAC AACCCTTGCG CAGGCGATCC ATTCGCACAG CGATCTCATC
CGGCGGCATC TCGGCGCCGC CATTGAGTCG AAGCGTCACA AATTTCTGGC GCTTAATGCG
GCGCTCTGGC AGGATGGCGT CTTTCTGTAT GTGCCGAAGC ATGTCAATGT CGAACTGCCG
TTGACGGCGA TGTTCTCGAT GCCCATCCCC GGCGGCGCGA TTGCGCCACG CAACCTGATC
ATCCTGGACG ACGGCGCCAG TGTCACGTTC GTTGAGGAGT ACCACTCGGT CGCCGCGTCG
GATCAGGCGT TTGCCGCGCC GGTGACAGAG ATGTTCCTCG GCAATGACGC AACGTTGCGC
TTCGTTGCCG TGCAGACGTG GGGTGAGGAT GTATACCACA TCGGCGCGCA AAAGGTGCGC
GCTGGACGTG GCGCATCGGT CGAGTGGGCG GCAGTGAATC TGGGCGCACG GGTACAGCAC
ATCGAAGCGG AAACCGCCCT CGAAGGCGAC GGCTCACGCG TTGAGTGGGT GGCAGCCACC
TTTGCCGCCG ATCACCAGAA CCTGCTGACG GCGCCCTGGC TCCGGCATAT CGGCGCAAAG
ACGGAAGCGC ATATGGACTT CAAGACCGTC GTGAAGGATC AGAGTTACAC CACCTTCGAC
GGCATGATCA AGATCGAGCA TCAGAGTCGC GCAACTGTCT CGCGGCTCGA GGAGCATGCG
CTCCATCTTT CGCCCAAAGC CCGCAGCGAC TCCATCCCCG GACTGATGAT CGACACCAAC
GATGTCGCCA GGGCGGGGCA TGCGTCGACC AGCGGCGAGG TGGATGAGGA GCAGTTGTTC
TATATGCGCT CACGCGGCAT TCCGCGTGAC GAAGCCATCC ATCTGATCGT GATGGGCTTC
TTCGAGCCGG TGCTTGATCG TATTCCCAAC GATGCGCTGC GTCAGCGGAT CGCGGAGATG
ATCGAAGCAA AGATATAA
 
Protein sequence
MTMKTFPPLA EISDALVIER SRAAGEPEWL TEQRVDAWRF FASAEPPYWR RTDLSKFKPE 
QVIAAADTAA TSLYQEEDLT DQGVVFTTLA QAIHSHSDLI RRHLGAAIES KRHKFLALNA
ALWQDGVFLY VPKHVNVELP LTAMFSMPIP GGAIAPRNLI ILDDGASVTF VEEYHSVAAS
DQAFAAPVTE MFLGNDATLR FVAVQTWGED VYHIGAQKVR AGRGASVEWA AVNLGARVQH
IEAETALEGD GSRVEWVAAT FAADHQNLLT APWLRHIGAK TEAHMDFKTV VKDQSYTTFD
GMIKIEHQSR ATVSRLEEHA LHLSPKARSD SIPGLMIDTN DVARAGHAST SGEVDEEQLF
YMRSRGIPRD EAIHLIVMGF FEPVLDRIPN DALRQRIAEM IEAKI