Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0669 |
Symbol | |
ID | 5207607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 837136 |
End bp | 837954 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640594285 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001275038 |
Protein GI | 148654833 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0848141 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGAGTG AGCAGGCGCA ACGGATCGCG CCGGAAACGG CGATCGGGCG GCGCGTCGGC GAGGTGCGGC GACGCCTGGC GCAGGCGTTC CCGCCGTTCG TTCTGCTGAG CGCGCTGGTA GCGGCATGGG AACTCATCGT ATGGCAACTG GCGCTGCCAG CCTGGTTGCT GCCGCCGCCA TCGCGCATCC TGACCACCCT GTTCAGCAAT CTGCCGATCC TGGGTGAGCA CGTCGCGGCG ACGCTGACTG TCACCATTCC CGGCTTTGGG CTGGCGCTGG TGACCGGCTT TGCGCTGGGA GTGCTGATCG ATGCTTCGCC ACTGCTGCGG CGCGCCGTCT ATCCACTGCT GGTCACATCG CAGACGGTGC CGATCGTGGC GATTGCGCCG CTCCTGGTGG TAGGGTTCGG GTTCGGCATG CTCCCCAAGG TGCTGGTCGT CGCGCTGGTG ACCTTCTTTC CGATCGTGGT TAACACTGCC GATGGGCTTC AGGCGGCAGA TCGCGATCAG CGGCGATTGC TGGAGGCAAT GGGCGCGAAT TACTGGCAAT TGTTGCGTCT GTTGCGCCTG CCGGCCGCCC TGCCGTCGAT TTTCACCGGT ATCAAAGTCG CTATCACCTA CAGCGTTATT GGGGCGGTGC TGGCTGAATG GATCGGTGCG AGCGCCGGGC TTGGCGTCTA CATCGCGCGT TCGCTGCGCG CTTTTCGCAC CGATCAGGTC TTCGTCGCGG CACTCGTGAC ATCGCTGCTG ACGATAGTCC TGTTCGCCCT GGTGACGCTG CTGGAGCGCT GGATAGTATC GTGGAGGGAC GAACCATGA
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Protein sequence | MRSEQAQRIA PETAIGRRVG EVRRRLAQAF PPFVLLSALV AAWELIVWQL ALPAWLLPPP SRILTTLFSN LPILGEHVAA TLTVTIPGFG LALVTGFALG VLIDASPLLR RAVYPLLVTS QTVPIVAIAP LLVVGFGFGM LPKVLVVALV TFFPIVVNTA DGLQAADRDQ RRLLEAMGAN YWQLLRLLRL PAALPSIFTG IKVAITYSVI GAVLAEWIGA SAGLGVYIAR SLRAFRTDQV FVAALVTSLL TIVLFALVTL LERWIVSWRD EP
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