| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0624 |
|---|
| Symbol | |
|---|
| ID | 5207562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 775301 |
|---|
| End bp | 776182 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640594243 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001274996 |
|---|
| Protein GI | 148654791 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.568796 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.149845 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAAT TGATCCAACT GACGCTGAGC GGCGTCGCCA ATGGTGCGAT CTTTGCGCTG
GTTGCGCTGG GTTTCGTCCT GATCTACAAA AGCAGCGATG TGATCAATTT TGCGCAGGGC
GAGTTGCTGC TGATCGGCGC TTACCTGACG TACACCACCG TAGAGATGAT CGGGTTGTGG
TGGCCCATCG GCGTGGTTAT CGCCGTGGTG CTGGCGGCGA TCGTCGGCGT GCTGGTCGAG
CAACTGGTGC TGCGCCCGCT GATCGGCGAG CCGACCATCT CGGTCATTAT GGTCACCATC
GGGCTGTCGT CGCTGCTGCG CGCGATCATC GGCGGTATCT GGGGCGTGAC GCCCAGAACT
GCGCCGCAGT TCCTTCCCCG CGATACGATC ACCCTGTTTG GGGCGAATGT CGGAGTAGAC
CGGCTCTGGG CGTTTGCGCT GGCGTTGACT CTCTTTGCAC TGCTCACTCT CTTCTTCCGC
TACAGTCGTG AAGGCATCGC TATGCGCGCC GTCGCCGACG ATCAGCAGGC GGCGTTGAGC
ATGGGGATCA GCGTCAAGCG GGTGTGGGCG ATTGCCTGGG CCATCGCAGC AGTGACCGCG
TCGGTCGGCG GTATTCTGTT GATGAGCATC TTTGGCGGGG TCTCCGGTCA GATTGCCCGC
GTTGGTCTGC TGGTCTTCCC GGTGGTGATC CTGGGCGGTC TCGACAGTAT TCCTGGAGCG
ATTGTCGGTG GTTTGATCAT CGGGTTGCTG CAATCGTTCG CCGGCGGGTA CCTGCCGCCC
GAACTCGGCA TGGGCGAGGT CGTTCCCTTC ATTGTGCTCC TGCTGATACT TCTGGTGCGC
CCTTACGGTC TGTTCGGGCA GCGGATCATC GAGCGCGTGT AG
|
|---|
| Protein sequence | MEKLIQLTLS GVANGAIFAL VALGFVLIYK SSDVINFAQG ELLLIGAYLT YTTVEMIGLW
WPIGVVIAVV LAAIVGVLVE QLVLRPLIGE PTISVIMVTI GLSSLLRAII GGIWGVTPRT
APQFLPRDTI TLFGANVGVD RLWAFALALT LFALLTLFFR YSREGIAMRA VADDQQAALS
MGISVKRVWA IAWAIAAVTA SVGGILLMSI FGGVSGQIAR VGLLVFPVVI LGGLDSIPGA
IVGGLIIGLL QSFAGGYLPP ELGMGEVVPF IVLLLILLVR PYGLFGQRII ERV
|
|---|
| |