Gene RoseRS_0613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0613 
Symbol 
ID5207551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp760246 
End bp761673 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content64% 
IMG OID640594232 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001274985 
Protein GI148654780 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0282412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTAGCG GATTACGACT GCGCCTGACA TTGCTCTATG CGCTGGCAGC GCTCGTGTTT 
GTGCTGCTGA TCGGCAGCGG CGCTTACCTG CTGGTGGCGC GCTACTTCAG CAACGTGACC
GATCTGGCGC TCCGGCACAA AATGGCGCAC GAATTTCATG CGCTTGGCGC GCCGCTGCCG
CCCGATCTGG AGCATGCCGA TCGCGACTGG TCGATCATCC GGCGTGAGGT GGTTGCGATC
CCATTTGTTC CGCCTGAACC GACGAGAGAA CGGCGAGAGC GTGAGGAGAC AGCATACGAA
GAGGACGACG AGCGTCCACG CTCGCTGACG ACCCCGGTCG ATGCAGCGGA ACTGGCAGCT
ATTGCCGTCC TGCCGCTGGA CGCATCGGGG CGATTGTTGT TTAACCCCAA TAACCTCGAT
CTGCCGCTGA ATCCTGATCA GGAAGCCTTC CAGACGGCGC TGGCGAAGGG CAGCGACCTG
CGCACGATCA CGCTGGACGA TGGACGTCGG GCGCGGCTGC TGACCTATCG CCTGACCCGA
TCCGACGGAC CGGCGGCGCT GCAACTGGTG CGTGAACTGA GCGATCAGGA TCAGGTGTTG
AACCAGTTGT TTGTCGGGCT GATTACGCTG GGAACATTCA GCATGGCGCT GGTTGGCGCG
ACGAGTTGGT GGCTGGCGGG GCGGGCGTTG CGCCCGGCGC AGGAAGCGTG GGAGCGACAG
CAACGCTTCA TCGCCAGCGC GAGTCACGAA CTGCGCGCTC CACTCACCCT CATTCGCGCC
AGCGCCGAAG TTGCGCTGCG CGATCTGCCG CCCGACGAGA GCGATCAACG CGCGTTGTTG
CACGATGTGC TGGCGGAGAG TGACCACATG CGCCGCCTGG TTGACGATCT GCTGACCCTC
ACCCGCCTCG ACAGCGGACA ACTGACGTTG ACGAAGGAAA CCGTCGATCT GACCGCCTTA
CTCGCCAGTA TTCAGCGTCA GGCGGCGCGT CTGGGGGAAC AGCGCGGCGT GGCGGTCGAA
CTGGCGGATG TCGGCGGTCT GATGCAGGCG GACGCCGAAC GCCTGCAGCA GGTCGTGTTG
ATCGCACTCG ACAATGCCTT GCGCCATACG CCATCCGGCG GGCGGATCAC CCTTGCGGCA
ACGCCGGCAG ATCGCATGGT TCAGATCACC GTCGCCGACA CCGGCAGCGG AATTGCGCCG
GAACACCTGC CGCACATCTT TGATCGGTTC TACCGGGCAG ACCCGGCGCG CGGACGGGAG
AACGGCAACG CCGGGCTGGG TCTCTCAATC GCAAAGGGGT TGGTAGAAGC AATGGGGGGA
CGTATCGCCG TAGAAAGCAC GGTGGGTGTC GGTACAACCG TCGTGATCTC CCTTCCGCGC
GCGCCCGACC GCAAGCCAGC GGAGTCGCCG GAACACATTC CGGGGTAG
 
Protein sequence
MFSGLRLRLT LLYALAALVF VLLIGSGAYL LVARYFSNVT DLALRHKMAH EFHALGAPLP 
PDLEHADRDW SIIRREVVAI PFVPPEPTRE RREREETAYE EDDERPRSLT TPVDAAELAA
IAVLPLDASG RLLFNPNNLD LPLNPDQEAF QTALAKGSDL RTITLDDGRR ARLLTYRLTR
SDGPAALQLV RELSDQDQVL NQLFVGLITL GTFSMALVGA TSWWLAGRAL RPAQEAWERQ
QRFIASASHE LRAPLTLIRA SAEVALRDLP PDESDQRALL HDVLAESDHM RRLVDDLLTL
TRLDSGQLTL TKETVDLTAL LASIQRQAAR LGEQRGVAVE LADVGGLMQA DAERLQQVVL
IALDNALRHT PSGGRITLAA TPADRMVQIT VADTGSGIAP EHLPHIFDRF YRADPARGRE
NGNAGLGLSI AKGLVEAMGG RIAVESTVGV GTTVVISLPR APDRKPAESP EHIPG