Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0613 |
Symbol | |
ID | 5207551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 760246 |
End bp | 761673 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640594232 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001274985 |
Protein GI | 148654780 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0282412 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTAGCG GATTACGACT GCGCCTGACA TTGCTCTATG CGCTGGCAGC GCTCGTGTTT GTGCTGCTGA TCGGCAGCGG CGCTTACCTG CTGGTGGCGC GCTACTTCAG CAACGTGACC GATCTGGCGC TCCGGCACAA AATGGCGCAC GAATTTCATG CGCTTGGCGC GCCGCTGCCG CCCGATCTGG AGCATGCCGA TCGCGACTGG TCGATCATCC GGCGTGAGGT GGTTGCGATC CCATTTGTTC CGCCTGAACC GACGAGAGAA CGGCGAGAGC GTGAGGAGAC AGCATACGAA GAGGACGACG AGCGTCCACG CTCGCTGACG ACCCCGGTCG ATGCAGCGGA ACTGGCAGCT ATTGCCGTCC TGCCGCTGGA CGCATCGGGG CGATTGTTGT TTAACCCCAA TAACCTCGAT CTGCCGCTGA ATCCTGATCA GGAAGCCTTC CAGACGGCGC TGGCGAAGGG CAGCGACCTG CGCACGATCA CGCTGGACGA TGGACGTCGG GCGCGGCTGC TGACCTATCG CCTGACCCGA TCCGACGGAC CGGCGGCGCT GCAACTGGTG CGTGAACTGA GCGATCAGGA TCAGGTGTTG AACCAGTTGT TTGTCGGGCT GATTACGCTG GGAACATTCA GCATGGCGCT GGTTGGCGCG ACGAGTTGGT GGCTGGCGGG GCGGGCGTTG CGCCCGGCGC AGGAAGCGTG GGAGCGACAG CAACGCTTCA TCGCCAGCGC GAGTCACGAA CTGCGCGCTC CACTCACCCT CATTCGCGCC AGCGCCGAAG TTGCGCTGCG CGATCTGCCG CCCGACGAGA GCGATCAACG CGCGTTGTTG CACGATGTGC TGGCGGAGAG TGACCACATG CGCCGCCTGG TTGACGATCT GCTGACCCTC ACCCGCCTCG ACAGCGGACA ACTGACGTTG ACGAAGGAAA CCGTCGATCT GACCGCCTTA CTCGCCAGTA TTCAGCGTCA GGCGGCGCGT CTGGGGGAAC AGCGCGGCGT GGCGGTCGAA CTGGCGGATG TCGGCGGTCT GATGCAGGCG GACGCCGAAC GCCTGCAGCA GGTCGTGTTG ATCGCACTCG ACAATGCCTT GCGCCATACG CCATCCGGCG GGCGGATCAC CCTTGCGGCA ACGCCGGCAG ATCGCATGGT TCAGATCACC GTCGCCGACA CCGGCAGCGG AATTGCGCCG GAACACCTGC CGCACATCTT TGATCGGTTC TACCGGGCAG ACCCGGCGCG CGGACGGGAG AACGGCAACG CCGGGCTGGG TCTCTCAATC GCAAAGGGGT TGGTAGAAGC AATGGGGGGA CGTATCGCCG TAGAAAGCAC GGTGGGTGTC GGTACAACCG TCGTGATCTC CCTTCCGCGC GCGCCCGACC GCAAGCCAGC GGAGTCGCCG GAACACATTC CGGGGTAG
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Protein sequence | MFSGLRLRLT LLYALAALVF VLLIGSGAYL LVARYFSNVT DLALRHKMAH EFHALGAPLP PDLEHADRDW SIIRREVVAI PFVPPEPTRE RREREETAYE EDDERPRSLT TPVDAAELAA IAVLPLDASG RLLFNPNNLD LPLNPDQEAF QTALAKGSDL RTITLDDGRR ARLLTYRLTR SDGPAALQLV RELSDQDQVL NQLFVGLITL GTFSMALVGA TSWWLAGRAL RPAQEAWERQ QRFIASASHE LRAPLTLIRA SAEVALRDLP PDESDQRALL HDVLAESDHM RRLVDDLLTL TRLDSGQLTL TKETVDLTAL LASIQRQAAR LGEQRGVAVE LADVGGLMQA DAERLQQVVL IALDNALRHT PSGGRITLAA TPADRMVQIT VADTGSGIAP EHLPHIFDRF YRADPARGRE NGNAGLGLSI AKGLVEAMGG RIAVESTVGV GTTVVISLPR APDRKPAESP EHIPG
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