| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0578 |
|---|
| Symbol | |
|---|
| ID | 5207516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 716413 |
|---|
| End bp | 718095 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640594197 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001274950 |
|---|
| Protein GI | 148654745 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0661] Predicted unusual protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCCTC TCGTTCGTCA GGCGCGCTAC CTTGGTCGAT ACCGCCAGAT TGCGCAGGTG
TTCTGGCAGT ATGGTTTCGG CTACCTGCTG GATCAATTAG GTCTCACAAC CCTCCTCTCG
ATGCCGCGTC GGATCATGCG CCGTCCGGCG CCTGATCCGA TCAGTGGTCC GGAGCGCCTC
CGCCTGGCGT TGACCGATCT CGGTCCAACG TTCGTCAAAC TGGGGCAGAT GCTGAGCACC
CGCCCTGACC TGTTGCCGCC AGCGTGGATC GAAGAACTGA ACAAACTGCA GGATACCGTA
CCCCCGTTTC CTGCCGATGT CGCCATTGCG ACCATCGAGG CGGAACTGCA TCGACCGATC
GACACCCTCT TTCGCTGTTT CGAGCGAGAA CCGCTGGCAG CGGCGTCGTT GGGGCAGGTG
CATGGCGCCG AACTGCCCGA CGGCACGCCA GTGGTCGTCA AAGTGCAGCG CCCGGACATC
CAGCAACTCG TCGTGATCGA CCTGGCGATC CTGTCGGAAC TGGCGGCGCT GGCGCAGCAG
AATACCGCCT TTGGCGAGCA GTATGACCTG GTCGAACTGG TATGGGAGTT TGGCGTCACC
CTGCGCGCCG AACTGGACTA TCGCCGCGAA GGGCGCAACG CTGAGCGCTT TCGTGCTAAT
TTTGCCGGCA ATCCGCATGT CTGCATCCCG CGTGTCTTCT GGAGCCACAC CAGCACTCGC
GTCCTGACGA CCGAGCGCAT CGCTGGCATC AAGATCACCG ACATTGCAGG CATGGATGCA
GCCGGTATGG ATCGGAAGCG CCTGGCGCGG CACAGCCTGG AACTGATCCT GCAAGAAATC
TTCGTTGATG GGTTCTTCCA GGGCGATCCC CATCCGGGCA ATCTGTTCGC CCTTCCAGGC
GAGGTGATCG GTGCAGTGGA CTTCGGGCAG GCAATTGCGC TCGACCGTGA GATGACCGGC
GATCTGCTGC TGCTTCTGGT GGCACTGCTT GAGCGCGACG CTGATGGAGC GTTGCGGGCG
TTACAGCGGT TGGGCGTTCT GACACAGCGC GAACTCTCCC CAGCGCTGCG ACGCGATATG
CGTCGCTTTG TCGATCACGT CGTTGATCGG TCGCTGGCAG AACTGTCTGC GCGGGAAATG
GGCGAAGAGT TGCTGACGCT CCTGCAACGT CACCGTCTGC GCCTCCCCGC GCCGCTGGCG
CTATTGTTGA AGGCAATTAT CATGATGGAG GGCATTGGCG TCCAGATCGA TCCGCAACTC
GACGTTTTCG GTATCGCCCG ACCCTACGCG ATGCGCGCCC TGGCGCAACT GAACAGCCCC
GATGCGCAGT TGCGCCGTGC GCTGCGCGAA CTCGAGGAAA TGCGCGGGAT CGTCAGCGCC
CTGCCGGGTC AGATGAGCAC CCTGGTTCAG CGGTTGAACG AAGGAGAGAT CCGCATCCAG
ACGCGCGAGA TGGAAATGCG GCGCCTGGCC GCAGCGCTGT CGCAGGCAGG AGCGCGTATC
GCGCTCGGTC TTATCGTCCT GGCGGCAACG CTGGGACTGG CAGGTCTGGC AATCGCAGCA
GCCATCGGCG GATGGGAAGG ATGGCCCGTG ATCATCCTGG CGGCAGGCGC GCTGATCGCC
CTGATCAGCG CTGGCGCAAC ATTGTTCATC AGCATCGCGC GCGGATCGGG CGGATCGTCG
TAG
|
|---|
| Protein sequence | MWPLVRQARY LGRYRQIAQV FWQYGFGYLL DQLGLTTLLS MPRRIMRRPA PDPISGPERL
RLALTDLGPT FVKLGQMLST RPDLLPPAWI EELNKLQDTV PPFPADVAIA TIEAELHRPI
DTLFRCFERE PLAAASLGQV HGAELPDGTP VVVKVQRPDI QQLVVIDLAI LSELAALAQQ
NTAFGEQYDL VELVWEFGVT LRAELDYRRE GRNAERFRAN FAGNPHVCIP RVFWSHTSTR
VLTTERIAGI KITDIAGMDA AGMDRKRLAR HSLELILQEI FVDGFFQGDP HPGNLFALPG
EVIGAVDFGQ AIALDREMTG DLLLLLVALL ERDADGALRA LQRLGVLTQR ELSPALRRDM
RRFVDHVVDR SLAELSAREM GEELLTLLQR HRLRLPAPLA LLLKAIIMME GIGVQIDPQL
DVFGIARPYA MRALAQLNSP DAQLRRALRE LEEMRGIVSA LPGQMSTLVQ RLNEGEIRIQ
TREMEMRRLA AALSQAGARI ALGLIVLAAT LGLAGLAIAA AIGGWEGWPV IILAAGALIA
LISAGATLFI SIARGSGGSS
|
|---|
| |