Gene RoseRS_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0565 
Symbol 
ID5207503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp701867 
End bp703282 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content61% 
IMG OID640594184 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_001274937 
Protein GI148654732 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACT CCGATCACAC CGCACTTCTC CTGATCGGTC ACGGCACCGA CGATCCCGAT 
GGTCTGGCAG AGTATCGCCA GATGGCGACG CTGGTTGGCG AGCGGTTGAA CACCGTGGTT
CAACCATGTT TTCTTGAACT TGCCGATCCG CCGATTGCAC ACGCAATCGA CGATTGTGTG
CGCGCAGGGT TCCGGCGAAT TGTTGCTTTG CCGTTACTCC TCGGCGCCGC CGGTCACCAG
AAGAACGACA TTCCGGTGGC GCTCAATCAG GCGCGCGCGC GTTATCCAGA CCTCGACATC
CGCTATGGGG CGCCGCTGGG CGTTCAGTAC ACGATGCTCC AGGCAGTGGC AGATCGAACC
GAAGCGGCGT ATGCGTCTGT CGCCGCAACC ATTCCCCGCG AAAAGACAGC GCTGGCGCTT
ATCGGGCGCG GGAGCAGCGA CCCGGACAGC AACTCCGATG TTGCGCGCAT GGCGCGTCTG
CTGTGGGAAG GGCGCGGATT TGGGTGGGTT GAGTACGGTT TCTACAGCGT CACCCGCCCC
GACGTTGCAA CCACCATCCG GCACTGCGTT GCGCTGGGAG CGGATCAGAT CATCGTCATT
CCCTACCTGC TCTTCACCGG GCGCATTCAT CAACGCATCA CGCAGCAGGT TGACATGGCG
CGGCAACAGT ATCCAGCGAT ACGCATCCTG CTGGCGCACC ATCTGGGGTT GCACGACGGT
GTTGTGCGCG CCATTGTGCA GCGTTACGAA GAAGCGCTTG ATGGCAGGGC GACGGTCAAC
TGCGACCTGT GCAAGTATCG TCGGTTGATG CAGGGGTTCG AGGACGAGTA CGGTCAACCG
CAAACGAGCG ACCATCACCA CGGCTTGCGA GGAACAGCGA GCAACCTTCC ACCGGGACTC
GCCGCAATCC TCCCGCCGCG CTACCGGAAT GGCGCGCCGG TAAGCGCCGC ACCGATGGGC
GCGGCGCCGC TCATCTATAA TGACGATGGG CGGGTGGCAT GGGATCGCGT ATGGGGTAGG
GACGATCCGA ACAGTCCATT CTGTGAACTG GCGCTGGCAG GCGGTCCACC GCACCGTGGC
ACACTCCTGG AGCCGGTTCA TCCCGAATCG GTGACTGCCA ATCCGGAACA GTACCGGGAC
GTTGTCGCAG AACTCGCCCG TGGTCTGCGG ATGGTCACCG GGTTGCCTGT CGTGACCGAT
GGCGCGCCTG GATGGATCGG GATTGTCTGC GACAGCGAAG AGATGGCGAT CTGGTTGCTG
CGGGCGATTG TTGTCGAAAA TGTGAGTGTG CGCCGTGAAG GAACGACTCT CTATCTCCCT
GCCGGACCCG ACTTCCGGCT GGACGGGGAG ATCAAGAACA TTATCACTGC TATCGCCAAG
ACATACCACT ACTGGAAAGA GCATGTTCTG GGATGA
 
Protein sequence
MSNSDHTALL LIGHGTDDPD GLAEYRQMAT LVGERLNTVV QPCFLELADP PIAHAIDDCV 
RAGFRRIVAL PLLLGAAGHQ KNDIPVALNQ ARARYPDLDI RYGAPLGVQY TMLQAVADRT
EAAYASVAAT IPREKTALAL IGRGSSDPDS NSDVARMARL LWEGRGFGWV EYGFYSVTRP
DVATTIRHCV ALGADQIIVI PYLLFTGRIH QRITQQVDMA RQQYPAIRIL LAHHLGLHDG
VVRAIVQRYE EALDGRATVN CDLCKYRRLM QGFEDEYGQP QTSDHHHGLR GTASNLPPGL
AAILPPRYRN GAPVSAAPMG AAPLIYNDDG RVAWDRVWGR DDPNSPFCEL ALAGGPPHRG
TLLEPVHPES VTANPEQYRD VVAELARGLR MVTGLPVVTD GAPGWIGIVC DSEEMAIWLL
RAIVVENVSV RREGTTLYLP AGPDFRLDGE IKNIITAIAK TYHYWKEHVL G