Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0531 |
Symbol | |
ID | 5207468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 665005 |
End bp | 666423 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640594151 |
Product | MiaB-like tRNA modifying enzyme YliG |
Protein accession | YP_001274905 |
Protein GI | 148654700 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.680198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.538373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTC ATATTATTAC CCTTGGGTGT CCGAAAAATC AGGTTGATAG CGAGGGCATG AGCAGCATTC TGGCGGCACA GGGGCATACG CCGGTCGCAC ATGCCGACGA TGCCGATGTG GTCGTCGTGA ATACCTGTTC CTTCATCGCT GCGGCGCGGG AAGAGACCCT CGACGTGCTG CGTGAAGTCG CTGCCCGCAA AACGCCTGGT CAATACCTGG TCGCAGCCGG TTGTATGGCA GAAAGCCACA GCGCGCTTGT TGCGGCAGCG CCCGGGGTCG ATGCGCTGCT CAGCACCCGC GAGTGGATGC GCATCGGGGA CGTGGTCGAC ACCCTTCAGC GTGAACCGGC GGTCGCTGCA TCCTCGGCAG CGCGCGAGAT CATTCCTCTC TCCAGCGCTC CCGCCTCGTC CGACGATCTG CGCGTCCCTG GCGCATACGC CGACTGGCGT ACCGCGCCGA TCCGTCGGCG CATTACCGGT CCCTCGGCGT ATCTGAAGAT TTCCGATGGG TGCAATCTTC GCTGTGCGTT CTGCACCATT CCGTCGTTCA AAGGCGATAT GCGCTCCAAA GCGGTAGGGG CGATCCTTGG CGAAGCGCAG GAACTGGCAG ACGCCGGGGT GAAAGAGATC GTGCTGGTGG CGCAGCACCT GACCGACTAC GGGCGCGATC TGGGGTTGAA GGACGGTCTG GCGCTGTTGC TCGACGAACT CTGTGCGGTG TTGCCGAAGG ATAGATGGGT GCGCCTGATG TACGCCTACC CCCACGGCAT CAGCGAGCGC CTGATTGCCA CGATGGCGCG CCATCCGCAG ATCTGCCATT ACCTGGATAT GCCGTTGCAG CATGCCCATC CCGAAACGCT GCGCCGGATG CACCGCCCGC CCGACAGTGA TCGCACCAGA CGCCTGATTG CCGACCTGCG CGCGGCGATG CCCGATATTG CGCTGCGCTC GACATTCATC ATCGGCTTTC CAGGGGAGAC CAGTGCCGAA TTTCGGGCGT TGACGGCGTT TCTCGAAGAA GTGCAGTTCG ACCGGGTAGG GGTCTTTCGC TATTCACGCG AGCCAGGCAC GCCAGCAGCA GCGTTGCCGG ATCAGATACC ACAGCGAGTC ATTGAGCGCC GCTGGCATAC GATCATGCGC TTACAGCAGG GTATTTCGCG CCAGCGCAAC CGTCGCTGGG TCGGGCGTGT CATTCGGGTG CTGGTGGAGG GACAGGGACA GACCGACGAC GGGCGCCTGC TGAGCGTCGG ACGCTCTTTC CGCGATGCTC CCGAAGTCGA TGGACAGGTG TTGTTCTGGG GAACCGCCGC CACTGGCACA TTCGTTGATG TGCGGGTGAC GCAGGCACTC GACTATGACC TGTGGGGTGA GATGGTCGAA GCGCCTGCGG ACGATGCGAG GAGTGAAAAC GGGACGTAG
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Protein sequence | MKFHIITLGC PKNQVDSEGM SSILAAQGHT PVAHADDADV VVVNTCSFIA AAREETLDVL REVAARKTPG QYLVAAGCMA ESHSALVAAA PGVDALLSTR EWMRIGDVVD TLQREPAVAA SSAAREIIPL SSAPASSDDL RVPGAYADWR TAPIRRRITG PSAYLKISDG CNLRCAFCTI PSFKGDMRSK AVGAILGEAQ ELADAGVKEI VLVAQHLTDY GRDLGLKDGL ALLLDELCAV LPKDRWVRLM YAYPHGISER LIATMARHPQ ICHYLDMPLQ HAHPETLRRM HRPPDSDRTR RLIADLRAAM PDIALRSTFI IGFPGETSAE FRALTAFLEE VQFDRVGVFR YSREPGTPAA ALPDQIPQRV IERRWHTIMR LQQGISRQRN RRWVGRVIRV LVEGQGQTDD GRLLSVGRSF RDAPEVDGQV LFWGTAATGT FVDVRVTQAL DYDLWGEMVE APADDARSEN GT
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