Gene RoseRS_0531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0531 
Symbol 
ID5207468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp665005 
End bp666423 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content62% 
IMG OID640594151 
ProductMiaB-like tRNA modifying enzyme YliG 
Protein accessionYP_001274905 
Protein GI148654700 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.680198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.538373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTC ATATTATTAC CCTTGGGTGT CCGAAAAATC AGGTTGATAG CGAGGGCATG 
AGCAGCATTC TGGCGGCACA GGGGCATACG CCGGTCGCAC ATGCCGACGA TGCCGATGTG
GTCGTCGTGA ATACCTGTTC CTTCATCGCT GCGGCGCGGG AAGAGACCCT CGACGTGCTG
CGTGAAGTCG CTGCCCGCAA AACGCCTGGT CAATACCTGG TCGCAGCCGG TTGTATGGCA
GAAAGCCACA GCGCGCTTGT TGCGGCAGCG CCCGGGGTCG ATGCGCTGCT CAGCACCCGC
GAGTGGATGC GCATCGGGGA CGTGGTCGAC ACCCTTCAGC GTGAACCGGC GGTCGCTGCA
TCCTCGGCAG CGCGCGAGAT CATTCCTCTC TCCAGCGCTC CCGCCTCGTC CGACGATCTG
CGCGTCCCTG GCGCATACGC CGACTGGCGT ACCGCGCCGA TCCGTCGGCG CATTACCGGT
CCCTCGGCGT ATCTGAAGAT TTCCGATGGG TGCAATCTTC GCTGTGCGTT CTGCACCATT
CCGTCGTTCA AAGGCGATAT GCGCTCCAAA GCGGTAGGGG CGATCCTTGG CGAAGCGCAG
GAACTGGCAG ACGCCGGGGT GAAAGAGATC GTGCTGGTGG CGCAGCACCT GACCGACTAC
GGGCGCGATC TGGGGTTGAA GGACGGTCTG GCGCTGTTGC TCGACGAACT CTGTGCGGTG
TTGCCGAAGG ATAGATGGGT GCGCCTGATG TACGCCTACC CCCACGGCAT CAGCGAGCGC
CTGATTGCCA CGATGGCGCG CCATCCGCAG ATCTGCCATT ACCTGGATAT GCCGTTGCAG
CATGCCCATC CCGAAACGCT GCGCCGGATG CACCGCCCGC CCGACAGTGA TCGCACCAGA
CGCCTGATTG CCGACCTGCG CGCGGCGATG CCCGATATTG CGCTGCGCTC GACATTCATC
ATCGGCTTTC CAGGGGAGAC CAGTGCCGAA TTTCGGGCGT TGACGGCGTT TCTCGAAGAA
GTGCAGTTCG ACCGGGTAGG GGTCTTTCGC TATTCACGCG AGCCAGGCAC GCCAGCAGCA
GCGTTGCCGG ATCAGATACC ACAGCGAGTC ATTGAGCGCC GCTGGCATAC GATCATGCGC
TTACAGCAGG GTATTTCGCG CCAGCGCAAC CGTCGCTGGG TCGGGCGTGT CATTCGGGTG
CTGGTGGAGG GACAGGGACA GACCGACGAC GGGCGCCTGC TGAGCGTCGG ACGCTCTTTC
CGCGATGCTC CCGAAGTCGA TGGACAGGTG TTGTTCTGGG GAACCGCCGC CACTGGCACA
TTCGTTGATG TGCGGGTGAC GCAGGCACTC GACTATGACC TGTGGGGTGA GATGGTCGAA
GCGCCTGCGG ACGATGCGAG GAGTGAAAAC GGGACGTAG
 
Protein sequence
MKFHIITLGC PKNQVDSEGM SSILAAQGHT PVAHADDADV VVVNTCSFIA AAREETLDVL 
REVAARKTPG QYLVAAGCMA ESHSALVAAA PGVDALLSTR EWMRIGDVVD TLQREPAVAA
SSAAREIIPL SSAPASSDDL RVPGAYADWR TAPIRRRITG PSAYLKISDG CNLRCAFCTI
PSFKGDMRSK AVGAILGEAQ ELADAGVKEI VLVAQHLTDY GRDLGLKDGL ALLLDELCAV
LPKDRWVRLM YAYPHGISER LIATMARHPQ ICHYLDMPLQ HAHPETLRRM HRPPDSDRTR
RLIADLRAAM PDIALRSTFI IGFPGETSAE FRALTAFLEE VQFDRVGVFR YSREPGTPAA
ALPDQIPQRV IERRWHTIMR LQQGISRQRN RRWVGRVIRV LVEGQGQTDD GRLLSVGRSF
RDAPEVDGQV LFWGTAATGT FVDVRVTQAL DYDLWGEMVE APADDARSEN GT