Gene RoseRS_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0516 
Symbol 
ID5207453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp650303 
End bp650794 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content60% 
IMG OID640594136 
ProductF0F1 ATP synthase subunit B 
Protein accessionYP_001274890 
Protein GI148654685 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.188958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.601675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAAAC TGGGTATTAA CTGGGGGTTG TTGATCGCGC AACTCATCAA TGTCATTTTC 
GTGGTCTGGT TGCTGACGAC GTTCCTGTAC CGCCCGATTC TGAACATGCT CAATCAGCGG
ACGAGCCGGA TCCAGGAGGG ATTGCAGGAC GCGGAGAAGG TGAAGGAGCA ACTGGCGAAC
GCGAAGCGCG ATTATGATGC TGAACTGGCG AAGGCGCGCC AGGAAGCGGC GGCTATTCTG
GCGCAGGCGC AGGAGCGCGC CCGCGCGCAG GCTGCCGAGA TTATCGCGCA GGCGCACCGC
GATGCCGAGA AGATCAAGAG TGACGCGCTC GCGCAGGCGG AACAGGAACG ATTGCGCATG
CTCGGCGAAC TCAAGGATCG CATGGCGGAA CTGGTGGTTC TCACTGCCGA ACGGGTGCTC
GGCGAGGAGT TGAAGACCAA CCACGACCGC CTGATCGAAG AGTCGCTGGC TGAGCTCGGA
AAGTACAATT GA
 
Protein sequence
MEKLGINWGL LIAQLINVIF VVWLLTTFLY RPILNMLNQR TSRIQEGLQD AEKVKEQLAN 
AKRDYDAELA KARQEAAAIL AQAQERARAQ AAEIIAQAHR DAEKIKSDAL AQAEQERLRM
LGELKDRMAE LVVLTAERVL GEELKTNHDR LIEESLAELG KYN