| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0498 |
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| Symbol | |
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| ID | 5207435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 632111 |
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| End bp | 632869 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640594118 |
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| Product | 2-deoxy-D-gluconate 3-dehydrogenase |
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| Protein accession | YP_001274872 |
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| Protein GI | 148654667 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.726139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGAAC TCTTTCGCCT CGATGGACGG GTTGCGCTGG TCACCGGCGG CGACAAGGGG
TTGGGACAGG GGATCGCCCT GGCGCTGGCG CACGCCGGAG CGGATGTGGC AGTTGTCTCC
CGCTCTGGCG ATGCCGCTGC CACCCTTTCC GCCATTGTCG CCGCAGGACG GCGCGGAATT
GCGTTGACCG CCGATCTGAG CACTACCGCG CCGATTGAAG GGCTTATCAA CGATACTGTC
GCTCAACTCG GTCGGCTCGA TATTCTGGTG AACAATGCCG GAATCATCCG GCGCGCACCG
GCGACCGAGT ACGGCTGGAG CGACTGGCGG GCTGTGCTCG ATGTGAACCT CGATGCGGTC
TGGGCGCTCT GTCAATCCGC CGGACGCCTG ATGATCGCAC AGGGACGCGG CAAGATCATC
AATGTGGCTT CTGTGCTTGC CTTTCAGGGC GGTTTGCGCG TACCTGCATA CGCCGCTGCC
AAACATGCGG TCGCCGGTCT GACGAAGGCG CTTGCCAACG AATGGGCGCG GTTGGGTGTG
AATGTCAATG CAATTGCGCC CGGCTATATG GTTACCGACA ATACCCAGGC GCTGCGCGAC
GATCCAGAGC GCTCCCGGCA GATCCTCGAA CGCATTCCAG CCGGACGCTG GGGCGTCCCC
GAAGACCTGG CAGGCGCTGC GATTTTTCTG GCGTCGTCCG CCAGCGACTA TGTGCATGGT
CATGTGCTTG TCGTTGATGG TGGATGGCTG GCACGGTGA
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| Protein sequence | MLELFRLDGR VALVTGGDKG LGQGIALALA HAGADVAVVS RSGDAAATLS AIVAAGRRGI
ALTADLSTTA PIEGLINDTV AQLGRLDILV NNAGIIRRAP ATEYGWSDWR AVLDVNLDAV
WALCQSAGRL MIAQGRGKII NVASVLAFQG GLRVPAYAAA KHAVAGLTKA LANEWARLGV
NVNAIAPGYM VTDNTQALRD DPERSRQILE RIPAGRWGVP EDLAGAAIFL ASSASDYVHG
HVLVVDGGWL AR
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