Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0465 |
Symbol | |
ID | 5207401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 591861 |
End bp | 593261 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640594085 |
Product | type I phosphodiesterase/nucleotide pyrophosphatase |
Protein accession | YP_001274840 |
Protein GI | 148654635 |
COG category | [S] Function unknown |
COG ID | [COG3379] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.267369 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000014976 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGCCCGTAC ATCGACGCAT ACTGATCATC GGCCTCGATT GTGCTGAACC CGAACTGGTG TTCGACAAAT GGCGCAACGA ACTGTCAACG ATAGATAGTC TCATGCGGCA GGGTGTCTAC ACACGTCTGG AGAGCTGCAT TCCGGCTATC ACGGTACCCG CCTGGGCCTG TATGATGAGT AGCCATGATC CGGGGCAACT AGGTATCTAC GGTTTTCGCA ATCGTGCCGA TCACAGTTAT GCTCGAATGA GCGTAGCAAA CTCTCGTTCG ATCACTGTTC CGCGTCTGTG GGATATACTC GGCAGGGTGG GGCGCCGTGT TGGTGTGGTT GGCGTTCCTC AGACCTATCC CGTCACATCT GTTAATGGCG ACCTGGTCAG TTGTTTTCTG ACGCCCAATG CACAAGTGCA GTTTACATAT CCGCTATCCC TCAAGCACGA TATTGCTCGC TGGATTGAGG GCGAATTCTT GATGGATGTG CCGAATTTTC GGTCTGAAGA CAAGGAATCC ATCCTCAAGA ATATCTATCG AATGACGGAT CAGCATTTTA CTGTTTGCAG GAGGTTGTTG GAGCGAAAGC GGTACGATTT GTTTATGACG GTTGATATGG GAGTAGATAG AATCCACCAT GCCTTTTGGA AACATATGGA CCCTCGACAT CCCAAGTACA TCCCAGAAAG TTCGTTTGCG TATGCTATTC GCGATTATTA TCGTTTTGTC GACGAAAAGA TTGCAGAACT ATTAAGACTG GTTGATGACG ATACTATTGT GCTTATTGTC TCTGATCATG GCGCGAAAGC GATGAAAGGT GGTTTTTGTT TGAACGAATG GCTTATTAAT GAAGGTTATC TGGTACTGAC TGAATATCCC GATACCCCGA TGTCACTTGA ACAATGTCGC GTAGACTGGT CGCATACACA TGCATGGGGT GCAGGTGGAT ATTATGGTCG TCTTTTCCTC AACATTGCGG GCCGTGATCC AGATGGTATT GTTGCACCGG GCGATGCAGA TCGATTGCGT AGTGAAATTA CGACAAAACT GGAGTCATTG CTCGATCATA ACGGAACGAT AATGGGAACA CGTGTATTTT GGCCCGAAGC GATCTATCAT GAAGTTCGAG GTTTTGCTCC CGATCTTATT ATCTATTTTG GTGATCTGAA CTGGCGATCA GTAGGAAGCA TCGGAGGGAA AACATTATAC ACTTTTGAGA ACGACACTGG TCCTGACGAT GCTAATCATG CACAATATGG CATCTTTATC CTCTACGACC CGCGGCAAGC GGGTGGTGGA CGTTATATCG ACACCATGAG CATTTACGAT GTTGCGCCAA CCTTGCTTCA CCTTCTTGAT ATGCAGGCGC CATCCAGTAT GATAGGAAAG GTGCGGGATC TGTGGGCTTG A
|
Protein sequence | MPVHRRILII GLDCAEPELV FDKWRNELST IDSLMRQGVY TRLESCIPAI TVPAWACMMS SHDPGQLGIY GFRNRADHSY ARMSVANSRS ITVPRLWDIL GRVGRRVGVV GVPQTYPVTS VNGDLVSCFL TPNAQVQFTY PLSLKHDIAR WIEGEFLMDV PNFRSEDKES ILKNIYRMTD QHFTVCRRLL ERKRYDLFMT VDMGVDRIHH AFWKHMDPRH PKYIPESSFA YAIRDYYRFV DEKIAELLRL VDDDTIVLIV SDHGAKAMKG GFCLNEWLIN EGYLVLTEYP DTPMSLEQCR VDWSHTHAWG AGGYYGRLFL NIAGRDPDGI VAPGDADRLR SEITTKLESL LDHNGTIMGT RVFWPEAIYH EVRGFAPDLI IYFGDLNWRS VGSIGGKTLY TFENDTGPDD ANHAQYGIFI LYDPRQAGGG RYIDTMSIYD VAPTLLHLLD MQAPSSMIGK VRDLWA
|
| |