| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0454 |
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| Symbol | |
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| ID | 5207390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 570091 |
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| End bp | 570717 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640594074 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001274829 |
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| Protein GI | 148654624 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.698939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00367889 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATCCCA TCCGTGTCGC ACTGGTCGAC GACCACAGCA TTGTCCGGCG CGGGTTAAGC
GCCTACTTTG CCGCTCAACC CGACATCACC ATCGTCGGGG AGGCCGCCAG CGGCGAAGAG
GCATTGCACC ACGCAGCAAC CTGGCAGGCG GATGTTATTG TGATGGACGT CCTCATGCCG
GGCGGGATCG ACGGCATCGA AACCACCCGC CGCCTGAAGC GTCTCCTGCC GCAGACACAG
ATCATCATCT TGAGCGGGTA CGCCGACGAC GCGCGGGTGA TCGGCGCATT GCGCGCAGGC
GCCATCACCT ACGTGGAGAA GGACAGCCAG CCGGAACAGT TGCTCGAAGC GGTGCGCGGC
GCCGCGCAGG GCAAAGCGAT CTTCGAGCCG GCGCTCATGC AGCGCATTCT CCAGGCGCAG
ACGATGAGAA GCAGCGACGC GCTCACCGAA CGCGAAGGGG AGGTGCTGAA ACTGCTGGCG
GAGGGATTGA CCAACGCCGA AATCGCCGCG CGCCTGTCGG TCGGCGAAGA GACGGTCAAG
ACGCACGTCG CCAGCATCCT GCGTAAACTC GGACTGGCGC ACCGCACACA GGCGGCGATC
TACGCCCTGC GGCATGGGTG GGTGTAG
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| Protein sequence | MHPIRVALVD DHSIVRRGLS AYFAAQPDIT IVGEAASGEE ALHHAATWQA DVIVMDVLMP
GGIDGIETTR RLKRLLPQTQ IIILSGYADD ARVIGALRAG AITYVEKDSQ PEQLLEAVRG
AAQGKAIFEP ALMQRILQAQ TMRSSDALTE REGEVLKLLA EGLTNAEIAA RLSVGEETVK
THVASILRKL GLAHRTQAAI YALRHGWV
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