Gene RoseRS_0434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0434 
Symbol 
ID5207370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp553221 
End bp555200 
Gene Length1980 bp 
Protein Length659 aa 
Translation table11 
GC content65% 
IMG OID640594060 
Productcarbamoyl-phosphate synthase L chain, ATP-binding 
Protein accessionYP_001274815 
Protein GI148654610 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID[TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.321717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTGCCA AACTTCTGAT AGCCAACCGC GGCGAGATCG CCGTTCGGAT CATTCATGCC 
TGTCACGCGA TGGGTATTGC CGCCGTTGTC GTATACAGCG AGGCGGATCG TCGGGCGTTG
CACGTGCGCA TGGCGGACGA GGCGCTGCCG ATTGGTCCCG CGCCTGCGCC GGAGAGTTAT
CTGCGCATCG AGGCGATCAT CGAGGCAGCG TTGCGCGCCG GTGCGCAGGC GATCCATCCC
GGCTACGGCT TCCTCTCTGA ACGCGCTGCT TTTTCGCGCG CCTGCCGCGA TGCCGGTCTG
GCGTTCGTCG GTCCTCCGCC GGAAGCGATC GAGGCGCTGG GTGATAAAAT CGCCGCGCGC
CGCCTGGCGC TCGCTACCGG CGTCCCGGTG GCGCCCGGCT ACCACGGCGC CGATCAGAGT
GACGAGACGC TGCTGCGCGA GGCGACGCGG ATCGGTTATC CGTTGCTGAT CAAAGCCAGC
GCGGGTGGCG GTGGACGCGG CATGCGGATC GTCACGAACG CCGATGAACT GATGCCGGCG
CTGGAGAGCG CCCGCCGCGA GGCGCGCGCC GCGTTCGGCG ATGATACGGT CTTCCTGGAA
AAGCTGATTG CCCGTCCGCG CCATATCGAG GTCCAGTTCC TGGCGGACGC CTATGGCAAC
GCCGTGCATC TGTTCGAGCG CGAGTGCTCG ATCCAGCGTC GCTACCAGAA GATTGTCGAA
GAATCGCCCT CCCCCGCGCT GACTCCCAAA CAGCGCGAGA TGATCGGCGA AGCGGCAGTG
CGCCTCGCGC GCGCCGCCGG TTACGTGAAT GCCGGTACTG CGGAGTTCCT GTACGACGAA
ACTGACGGCA GTTTTGCATT CCTTGAAGTC AACGCGCGCT TACAGGTCGA ACATCCGGTC
ACCGAGGCAG TGACCGGCGT CGATCTGGTG CAGTTGCAGA TCGCTATCGC CGGCGGCGCG
CGCCTTCCCT TCCGCCAGGA AGATGTGCAG CAGCGCGGGC ATGCCATCGA GGTGCGCCTC
TGCGCCGAAG ACCCGGTGAC CTTCCTGCCA GCCGGTGGAC GGCTCACGCG CTTCGATCTG
CCGGACGATA TTCGTTGTGA TAGCGGCTTT GAAACCGGTG ACGAGGTAAC GCTGTACTAC
GACTCGCTGC TGGCGAAACT GATCGTTCAT GCCGATGATC GCTCCGTCGC AATTGCGAAG
TTGCGCACCG CCCTCGATGC CTGCACCGTC GAAGGCGTGA CGACCAACCT GCCGTTGTTG
CGCGCTATCG CTGCACATCC GGCATTCGCC GCTGGCGAAA CGACCACCGA TTTTCTGACG
ACCCATCAGG TAGCGGCGCG TCTCCCTGCG CCTGCGCCTC TGCCGGACGA GGTGGTGCTG
GCGGCGGCAA TCGCCGATGT TCTCGCGCTG CCGTTCGGAA GAGCCGCTGC GCGCGATCCG
TGGTCTGCGC TGGGACCGTG GCGCCTGCTG CGTGCCGATA TGCCGCTCCG CTACCGTGAC
GGGGAACGCG AGCGTTGTGT GCGCGTCACC GAATGCGCCA GCGAGTGGCG CGTTGAGATC
GATGGAACGA CCTGCACCGT CGGGGTGCTG GCAACGCACC CCGATCACCT GATCGTGCGC
ACGACGGACG GACGCATCGA GCGGTTTGGC ATAGCGCGCG ACGGCGCCGG GTTGCGCGTC
GAATGGCAGG GGAAGCGTTT TTATCTCTCT CACGCAACGC TCGATGTTGA ACATCTTGGG
GTGCGCGGGC ATAGTCACAG CCGCGCCGGA TTGGAAGCGC CGATGCCAGG CACGATTGTG
CGCATTCTGG TGAACGAAGG GGATCGCGTG GCGGCGCACC AACCGCTGGT GGTGCTGGAG
GCGATGAAAA TGGAACATAT CGTCGCCGCC CCTCACGACG GCATCATCCT GCGTCTGCCC
TACGCTGTCG GTGCGCTGGT CGCCAAAGGC GCAACGCTGG TCGAAATGGA AGAAGGGTGA
 
Protein sequence
MFAKLLIANR GEIAVRIIHA CHAMGIAAVV VYSEADRRAL HVRMADEALP IGPAPAPESY 
LRIEAIIEAA LRAGAQAIHP GYGFLSERAA FSRACRDAGL AFVGPPPEAI EALGDKIAAR
RLALATGVPV APGYHGADQS DETLLREATR IGYPLLIKAS AGGGGRGMRI VTNADELMPA
LESARREARA AFGDDTVFLE KLIARPRHIE VQFLADAYGN AVHLFERECS IQRRYQKIVE
ESPSPALTPK QREMIGEAAV RLARAAGYVN AGTAEFLYDE TDGSFAFLEV NARLQVEHPV
TEAVTGVDLV QLQIAIAGGA RLPFRQEDVQ QRGHAIEVRL CAEDPVTFLP AGGRLTRFDL
PDDIRCDSGF ETGDEVTLYY DSLLAKLIVH ADDRSVAIAK LRTALDACTV EGVTTNLPLL
RAIAAHPAFA AGETTTDFLT THQVAARLPA PAPLPDEVVL AAAIADVLAL PFGRAAARDP
WSALGPWRLL RADMPLRYRD GERERCVRVT ECASEWRVEI DGTTCTVGVL ATHPDHLIVR
TTDGRIERFG IARDGAGLRV EWQGKRFYLS HATLDVEHLG VRGHSHSRAG LEAPMPGTIV
RILVNEGDRV AAHQPLVVLE AMKMEHIVAA PHDGIILRLP YAVGALVAKG ATLVEMEEG