Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0434 |
Symbol | |
ID | 5207370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 553221 |
End bp | 555200 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640594060 |
Product | carbamoyl-phosphate synthase L chain, ATP-binding |
Protein accession | YP_001274815 |
Protein GI | 148654610 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.321717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTGCCA AACTTCTGAT AGCCAACCGC GGCGAGATCG CCGTTCGGAT CATTCATGCC TGTCACGCGA TGGGTATTGC CGCCGTTGTC GTATACAGCG AGGCGGATCG TCGGGCGTTG CACGTGCGCA TGGCGGACGA GGCGCTGCCG ATTGGTCCCG CGCCTGCGCC GGAGAGTTAT CTGCGCATCG AGGCGATCAT CGAGGCAGCG TTGCGCGCCG GTGCGCAGGC GATCCATCCC GGCTACGGCT TCCTCTCTGA ACGCGCTGCT TTTTCGCGCG CCTGCCGCGA TGCCGGTCTG GCGTTCGTCG GTCCTCCGCC GGAAGCGATC GAGGCGCTGG GTGATAAAAT CGCCGCGCGC CGCCTGGCGC TCGCTACCGG CGTCCCGGTG GCGCCCGGCT ACCACGGCGC CGATCAGAGT GACGAGACGC TGCTGCGCGA GGCGACGCGG ATCGGTTATC CGTTGCTGAT CAAAGCCAGC GCGGGTGGCG GTGGACGCGG CATGCGGATC GTCACGAACG CCGATGAACT GATGCCGGCG CTGGAGAGCG CCCGCCGCGA GGCGCGCGCC GCGTTCGGCG ATGATACGGT CTTCCTGGAA AAGCTGATTG CCCGTCCGCG CCATATCGAG GTCCAGTTCC TGGCGGACGC CTATGGCAAC GCCGTGCATC TGTTCGAGCG CGAGTGCTCG ATCCAGCGTC GCTACCAGAA GATTGTCGAA GAATCGCCCT CCCCCGCGCT GACTCCCAAA CAGCGCGAGA TGATCGGCGA AGCGGCAGTG CGCCTCGCGC GCGCCGCCGG TTACGTGAAT GCCGGTACTG CGGAGTTCCT GTACGACGAA ACTGACGGCA GTTTTGCATT CCTTGAAGTC AACGCGCGCT TACAGGTCGA ACATCCGGTC ACCGAGGCAG TGACCGGCGT CGATCTGGTG CAGTTGCAGA TCGCTATCGC CGGCGGCGCG CGCCTTCCCT TCCGCCAGGA AGATGTGCAG CAGCGCGGGC ATGCCATCGA GGTGCGCCTC TGCGCCGAAG ACCCGGTGAC CTTCCTGCCA GCCGGTGGAC GGCTCACGCG CTTCGATCTG CCGGACGATA TTCGTTGTGA TAGCGGCTTT GAAACCGGTG ACGAGGTAAC GCTGTACTAC GACTCGCTGC TGGCGAAACT GATCGTTCAT GCCGATGATC GCTCCGTCGC AATTGCGAAG TTGCGCACCG CCCTCGATGC CTGCACCGTC GAAGGCGTGA CGACCAACCT GCCGTTGTTG CGCGCTATCG CTGCACATCC GGCATTCGCC GCTGGCGAAA CGACCACCGA TTTTCTGACG ACCCATCAGG TAGCGGCGCG TCTCCCTGCG CCTGCGCCTC TGCCGGACGA GGTGGTGCTG GCGGCGGCAA TCGCCGATGT TCTCGCGCTG CCGTTCGGAA GAGCCGCTGC GCGCGATCCG TGGTCTGCGC TGGGACCGTG GCGCCTGCTG CGTGCCGATA TGCCGCTCCG CTACCGTGAC GGGGAACGCG AGCGTTGTGT GCGCGTCACC GAATGCGCCA GCGAGTGGCG CGTTGAGATC GATGGAACGA CCTGCACCGT CGGGGTGCTG GCAACGCACC CCGATCACCT GATCGTGCGC ACGACGGACG GACGCATCGA GCGGTTTGGC ATAGCGCGCG ACGGCGCCGG GTTGCGCGTC GAATGGCAGG GGAAGCGTTT TTATCTCTCT CACGCAACGC TCGATGTTGA ACATCTTGGG GTGCGCGGGC ATAGTCACAG CCGCGCCGGA TTGGAAGCGC CGATGCCAGG CACGATTGTG CGCATTCTGG TGAACGAAGG GGATCGCGTG GCGGCGCACC AACCGCTGGT GGTGCTGGAG GCGATGAAAA TGGAACATAT CGTCGCCGCC CCTCACGACG GCATCATCCT GCGTCTGCCC TACGCTGTCG GTGCGCTGGT CGCCAAAGGC GCAACGCTGG TCGAAATGGA AGAAGGGTGA
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Protein sequence | MFAKLLIANR GEIAVRIIHA CHAMGIAAVV VYSEADRRAL HVRMADEALP IGPAPAPESY LRIEAIIEAA LRAGAQAIHP GYGFLSERAA FSRACRDAGL AFVGPPPEAI EALGDKIAAR RLALATGVPV APGYHGADQS DETLLREATR IGYPLLIKAS AGGGGRGMRI VTNADELMPA LESARREARA AFGDDTVFLE KLIARPRHIE VQFLADAYGN AVHLFERECS IQRRYQKIVE ESPSPALTPK QREMIGEAAV RLARAAGYVN AGTAEFLYDE TDGSFAFLEV NARLQVEHPV TEAVTGVDLV QLQIAIAGGA RLPFRQEDVQ QRGHAIEVRL CAEDPVTFLP AGGRLTRFDL PDDIRCDSGF ETGDEVTLYY DSLLAKLIVH ADDRSVAIAK LRTALDACTV EGVTTNLPLL RAIAAHPAFA AGETTTDFLT THQVAARLPA PAPLPDEVVL AAAIADVLAL PFGRAAARDP WSALGPWRLL RADMPLRYRD GERERCVRVT ECASEWRVEI DGTTCTVGVL ATHPDHLIVR TTDGRIERFG IARDGAGLRV EWQGKRFYLS HATLDVEHLG VRGHSHSRAG LEAPMPGTIV RILVNEGDRV AAHQPLVVLE AMKMEHIVAA PHDGIILRLP YAVGALVAKG ATLVEMEEG
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