Gene RoseRS_0381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0381 
Symbol 
ID5207316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp480642 
End bp481316 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content56% 
IMG OID640594006 
Producthypothetical protein 
Protein accessionYP_001274762 
Protein GI148654557 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.662053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0293555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTTC GCAGACTTAT CGTTACGCCT GGAATAGTTG CTGTTGCGGC TGTGCTATTG 
GCAGTCTCAG CCATCGTGTA TGCAGCCGGT GGGCAGCATG GTCAGGCCGT CGCACCAGCG
CCTCAGATAG TGGGGTCCGA CATACCAGCG CCTCCGCAGC CGTATGTGTC CACCGCTCAA
TCTGCCGCCA GCCCGGTAGC CCTGTCCTCC ACGCTGAGTT ACTATTTCAT CAGCGGGAAC
ACGTTTACGC CTGGCGGACT GGTTTCTTAC TCGCGCCAGG CGACCGGGTG CGTGAACCAG
ATGCCCCTGG GCATTCCGTT CTCCGCACCG GTGCACTTGC CGCAAGGATC ACAGGTGGTG
TCGATCACAC TCTATACGTA TGATTCGGTA ATCACGACGA CCACCAGCAC AGCCTATTTC
ATTTTGAACG ATGGAAAGGG AAACGGCGGA TTTTCGGTGT CAGCCACAAG CCCGCCCAAT
ACGAGCGGCT ACCGGCAAAC CAACAGCGTA GAAAACAACC CGGTGACGAT TGACAACCAG
AACTACAACT ACCTGGTCGA ATGGCGCAAG AATTTGGGCA CGCCTGATTC GGCTACATTG
AGTTTGTGCG GAGTGCGGGT GGCTTACTAC GCTCCACTCT CTGCAGCGTT GCACTTGCCG
ATCATCTTGA AGTAG
 
Protein sequence
MNVRRLIVTP GIVAVAAVLL AVSAIVYAAG GQHGQAVAPA PQIVGSDIPA PPQPYVSTAQ 
SAASPVALSS TLSYYFISGN TFTPGGLVSY SRQATGCVNQ MPLGIPFSAP VHLPQGSQVV
SITLYTYDSV ITTTTSTAYF ILNDGKGNGG FSVSATSPPN TSGYRQTNSV ENNPVTIDNQ
NYNYLVEWRK NLGTPDSATL SLCGVRVAYY APLSAALHLP IILK