Gene RoseRS_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0342 
Symbol 
ID5207277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp438289 
End bp439155 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content64% 
IMG OID640593968 
Productmolybdopterin dehydrogenase, FAD-binding 
Protein accessionYP_001274724 
Protein GI148654519 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.461873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCGG CACCCTTTCA GTATTTTGCA CCCAGGACGG TCAACGAGGC AATCGGGTTG 
CTCCAGCAGC ACGGAGACGA CGCCAAGTTG CTGGCAGGCG GTCACTCGCT GCTCCCCGCG
CTGAAACTGC GCCTGGCACA ACCCGCAGTG CTGATCGATA TCAGTCATGT GTCGGAGTTG
AAGGGCATCA CCTCCAACGG AGATCGTCTG GTAATCGGCG CTGGCGCAAC CTATCACGAG
ATTGCGACGA GTGAGGCGGT GCGTTCCGGT TGCCTGGCGC TTGCCGAGTG CGTTGGACAG
ATCGGCGATA TTCAGGTGCG CAATCGTGGA ACTCTTGGCG GGTCGCTGGC GCATGCCGAT
CCGGCAGCTG ATCTCCCGGC GGTTGTGCTG GCGCTCGGCG CGACGATTAA CGTGATGGGA
CCGAACGGCG CGCGCAGCAT TGCCGCCGAC GATATGTTCG TGGCGATGAT GACCACGGCG
ATCTCGCCAG ACGAAGTGAT GACGTCGGTG ACATTCCCCA TTCTGGGCAG GGGCGAAGGC
GCAGCATACG CCAAACTGCG CCAGCCAGCG TCGCGCTACG CTATCGTCGG TGTGGCAGCG
TATGTCAAAC TCGACGGCGG AACCGTTGCT GCGTGTCGCA TCGGCGTCAC CGGCGCCGGT
GCAGTTGCGG TACGCCAGCC AGCCGCAGAA GCGGCGCTGG TCGGCACCTC TGGCGATGAC
GCAGCGGTGG CGGCAGCGGC GAATGCTGCT GGCGACGGGA TCGATTACCT GGGGGACATC
CATGCATCGG CGGAGTACCG CCAGGCGATG GTGAAGGTCT ATACCCGCCG CGCGCTGACC
GAAGCGCTCC GCCGCGCACG CGCGTAA
 
Protein sequence
MIPAPFQYFA PRTVNEAIGL LQQHGDDAKL LAGGHSLLPA LKLRLAQPAV LIDISHVSEL 
KGITSNGDRL VIGAGATYHE IATSEAVRSG CLALAECVGQ IGDIQVRNRG TLGGSLAHAD
PAADLPAVVL ALGATINVMG PNGARSIAAD DMFVAMMTTA ISPDEVMTSV TFPILGRGEG
AAYAKLRQPA SRYAIVGVAA YVKLDGGTVA ACRIGVTGAG AVAVRQPAAE AALVGTSGDD
AAVAAAANAA GDGIDYLGDI HASAEYRQAM VKVYTRRALT EALRRARA