Gene RoseRS_0327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0327 
Symbol 
ID5207262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp417152 
End bp417919 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content58% 
IMG OID640593953 
Producthypothetical protein 
Protein accessionYP_001274709 
Protein GI148654504 
COG category[S] Function unknown 
COG ID[COG1656] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.359144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0143228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCT TAACCGTACA GGAGCGGGGA CTGGCGCTGA TCCGCGTCTA TGGCGATCTG 
AACGATTTTC TGCCGCCCGG TCGGCGCGAA ACGTGGTTTG AACGTCCATG CAAAGGGCAC
GAGACGATCA AGAACCTGAT CGAGACGTGT GGTGTGCCCC ATCCTGAGAT CGGCGCGCTG
ATCGTTGGCG GTCATCCGGT CAATTTCGAC TACCCGGTGC AACCGGGCGA CATGATCGAG
GTCTTCCCGA TCACCATGGC GCCCGCCTCG TCAGTCACAC TGCGTCCCCC GCTTGATGAA
CCACGCTTCG TACTCGATAC GCACCTGGGG CGACTGGCGG CATACCTGCG GATGCTGGGC
TACGATAGCC TGTACTGGAA CGATGCGCAC GACGCCGAAC TGGCGCGTCT GGCGGGTGAG
GAACGCCGGA TCTTGCTCAC ACGCGACCGG GAATTGCTCA AACGAAGCAT TGTTGTCTAT
GGCTCGTTTG TGCGCGAAGT TATTCCGGCG CGTCAGATTG TCGAAGTCAT GCGGCGGTTC
AACCTGACGC CGACGTCAAC CGTTTTCCAG CGTTGTATGC GGTGCAACAG TCTGACGACA
GCGGTCGAGA AAGCCGATAT TGAGCATCTT CTCGAACCCA GGACGCGGTT GTACTTCGAT
ACCTTTCGAC GTTGCATTGC CTGTGGCAAG ATCTACTGGC AGGGTTCGCA TTACACCCGC
ATGGCGACGC TACTGGAGCA CTCGGTCCGG TTGAAGGTTG AAGGTTGA
 
Protein sequence
MNILTVQERG LALIRVYGDL NDFLPPGRRE TWFERPCKGH ETIKNLIETC GVPHPEIGAL 
IVGGHPVNFD YPVQPGDMIE VFPITMAPAS SVTLRPPLDE PRFVLDTHLG RLAAYLRMLG
YDSLYWNDAH DAELARLAGE ERRILLTRDR ELLKRSIVVY GSFVREVIPA RQIVEVMRRF
NLTPTSTVFQ RCMRCNSLTT AVEKADIEHL LEPRTRLYFD TFRRCIACGK IYWQGSHYTR
MATLLEHSVR LKVEG