Gene RoseRS_0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0318 
Symbol 
ID5207253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp405964 
End bp406545 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content62% 
IMG OID640593944 
Producturacil-DNA glycosylase superfamily protein 
Protein accessionYP_001274700 
Protein GI148654495 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID[TIGR00758] uracil-DNA glycosylase, family 4 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.100378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0408737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATTT CCCTGGTGCA GCAGCAACAC TGTGTGCGTT GTCCAGCGCT TGTCGCCAGT 
CGGCGGCGCA TCGTTCATGG CTACGGCGAC GTGATGAGCG GCATCGTCTT TATCGGCGAA
GCGCCGGGGC GTCACGGCGC CGATCAGACA GGCATTCCGT TTTGGGGTGA CCGCTCAGGA
CGCATCTTGC GCCGTATGCT GGTCCGCATG GGTCTCGCCA GCGACGAAAC CGCGACAGCG
TCGCTGCGGT GTTTCATCAC CAATACGGTG CGCTGCTGTC CACCGGGAAA CCGCACCCCC
ACGGCTGCAG AAGTGCAAGC CTGTCGTGAA TGGTTGGACA CTGAACTCGA TGCGATCAAA
CCACGTCTGC TCGTTCCGGT TGGGCGCATT GCGCTCCAGG AGGTGGGCAA ACGGTATCTG
GAAGGTGCGC CGGGCGCCAT CCGCACGCTC CACGCAACCG TACTTCGCGG CAGAGAGGTC
ACCATCCTGC CCATGATGCA CCCGGCGCGC ATCAGTCGTG TCGATGCTGA AGCGTTCATT
GCGGCAATGC AGCCGCTCGT TGACGGAAGG AATGAACCAT GA
 
Protein sequence
MMISLVQQQH CVRCPALVAS RRRIVHGYGD VMSGIVFIGE APGRHGADQT GIPFWGDRSG 
RILRRMLVRM GLASDETATA SLRCFITNTV RCCPPGNRTP TAAEVQACRE WLDTELDAIK
PRLLVPVGRI ALQEVGKRYL EGAPGAIRTL HATVLRGREV TILPMMHPAR ISRVDAEAFI
AAMQPLVDGR NEP