Gene RoseRS_0316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0316 
Symbol 
ID5207251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp403902 
End bp404675 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content61% 
IMG OID640593942 
ProductTatD family hydrolase 
Protein accessionYP_001274698 
Protein GI148654493 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.207917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.040307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCAA CACACTTTAT CGACACGCAT GCTCATCTTG GATTGGCTCA GTTCGATGCG 
GATCGCGGCG CTGTTCTGGC TCGCGCCGCA GCTGCCGGGG TTGTGCGGAT CGTAGAAATT
GGCTACGACC TGGCAACGTC GCGCGCTGCG GTTGCCCTTG CGGCGCAGCA CGAACCGATC
TACGCGGTTG TCGGCGTGCA GCCGAACCAT GTGGCCGAAT TGCCGGACGA CTGGCTCGAT
CAGGTGCGTG CGCTGGCAGG GCAACCGAAG GTCGTCGCCA TTGGCGAGAT CGGTCTGGAT
TACTACTGGA ATGCAGCTCC GGCCGCTCAG CAAGAAGCCT GTTTCCGGGC GCAACTCGAT
CTGGCGCGTG AACTGGGATT GCCCGTCGTT ATTCACAGCC GCGATGCGCA TGATGATACG
ATCCGCGTGT TACGCGATGC GGCGCGTGGT CTGACCGGCG TTATGCACTC GTTCTCCGGC
GACTGGAGGT ATGCTGAGCA CTGCCTGGAG ATTGGCTTCT CTCTCTCCTT CAGTGGTCCG
GTCACCTTCC CGAAAGCCGT CGATCTGCAC GAGGTGGTGC GACGCACCCC GCTCGACCGG
CTTCTCACCG AAACCGACAG CCCCTATCTG GCGCCGCACC CCTTGCGTGG AAAGCGTAAC
GAACCCGCCA ATGTTCGTCT GATTGCCGAA CGTCTTGCTG TGCTGCGCGA AATGCCGCTC
GATGCGCTGG TTGATGCCGT GTGGCGCAAT GCGAAAGCGA TATTCGGGCT ATGA
 
Protein sequence
MDATHFIDTH AHLGLAQFDA DRGAVLARAA AAGVVRIVEI GYDLATSRAA VALAAQHEPI 
YAVVGVQPNH VAELPDDWLD QVRALAGQPK VVAIGEIGLD YYWNAAPAAQ QEACFRAQLD
LARELGLPVV IHSRDAHDDT IRVLRDAARG LTGVMHSFSG DWRYAEHCLE IGFSLSFSGP
VTFPKAVDLH EVVRRTPLDR LLTETDSPYL APHPLRGKRN EPANVRLIAE RLAVLREMPL
DALVDAVWRN AKAIFGL