Gene RoseRS_0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0304 
Symbol 
ID5207239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp391288 
End bp392181 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content45% 
IMG OID640593930 
Producthypothetical protein 
Protein accessionYP_001274686 
Protein GI148654481 
COG category[S] Function unknown 
COG ID[COG5483] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.352095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.186853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTCA TGCTGTACCG TCGAAAAGTT CTTTTAGCAT TGATAGACAT CTTTGGTGGT 
GCTATAGATA AACTTTTCTT GCAGAAAATG CTTTTTTTGC TGAGTCAGCG GCAGGAAAAA
CCAGTCTATG AGTTTATTCC CTATAACTAC GGTGGCTACT CGTTCACTGC TCAGTGGGAC
ATTAATGGAT TGTGTGCCAG AGCTTTGTTG CAGGAAGATG AGTATACGAT TACTCTTATC
GAAAAACAGA ATAGCCTGAA CAGTCTTCAT CCCCGTGATA CCTGGATCAT TCGTGAAATC
TTGCGGAAGT ATCGGAAGAA ACAGAGAAAT GAGCTGCTTC GTGAGTTGTA TGAGCAATAT
CCCTACTATG CCACACGCAG TAAAATCCTG GAAGAAGTCC TGGATAAGGA AGCGCAAAAA
CGAGTAGAAC AGTATAGATA TGTGGAATAT CGAACCGTCT TGTTTACTAT CGGCTATGAA
GGACGTTCGC TGGAAAATTA TCTTAATGCC TTGATCAGAA ACGGCATCAG GGTGCTGGTC
GATGTTCGCA ATAACCCGGT GAGCAGGAAA CCAGGGTTTA GCAAGCGCCA GTTGGAACGG
ATATGCAGGA ACGTTGACAT TGAATACCGA CATTTTCCAG ACGTGGGTAT TGCCCCTGAG
TTGAGAAAAG GCTTGAAGAC GCAAGATGAT TACAACGAAC TATTTGCCGC ATATCGCCGC
AAGGTTTTAC CTGCTACGGT ATCTACCCAA CAAGAAATCC TGAACATTCT TCAGTGCTAT
CGCCGTATCG CTCTTACATG CTTTGAAGCT GAGAGCCAGC GCTGCCATCG TCATCATCTG
GCCGAGGCTA TCAGTAAGTT GCCTGGCTTT GCTTACGAGG TGGAACATCT GTGA
 
Protein sequence
MNVMLYRRKV LLALIDIFGG AIDKLFLQKM LFLLSQRQEK PVYEFIPYNY GGYSFTAQWD 
INGLCARALL QEDEYTITLI EKQNSLNSLH PRDTWIIREI LRKYRKKQRN ELLRELYEQY
PYYATRSKIL EEVLDKEAQK RVEQYRYVEY RTVLFTIGYE GRSLENYLNA LIRNGIRVLV
DVRNNPVSRK PGFSKRQLER ICRNVDIEYR HFPDVGIAPE LRKGLKTQDD YNELFAAYRR
KVLPATVSTQ QEILNILQCY RRIALTCFEA ESQRCHRHHL AEAISKLPGF AYEVEHL