Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0296 |
Symbol | |
ID | 5207231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 377692 |
End bp | 378372 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640593922 |
Product | hypothetical protein |
Protein accession | YP_001274678 |
Protein GI | 148654473 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000854832 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0172701 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGAA TTATGATTCC GACGTTTCCG AAAAAGCCCA TTCCGGAAAA TCCAAAAATC TACCATATTA CTCACGTTGA CAATATACGA AACATTGTAT CAACAGGAGG GCTGCTGTCT GACGCGCGCA TACTTCAGCA GGGCGGGCCG ACGCAAATGA TCGGTCTATC CAACATCAAG CGACGTCGGA TTGAAGAACT GGAGGTTCGA TGTCATCCTG GCACAAAAGT GGGTGAATAT GTCCCTTTTT ATTTCTGCCC CCGTTCGATT ATGCTGTATG TGATTCACCG TGCAGACCAC CCCGAACTTA TGTATCGCGG AGGGCAAGAT TCGATCGCGC ATCTTGAGGC CGATCTTCAT CAAGTTGTAG ACTGGGCTGA CAATAACGGC GTTCGCTGGG CATTTTCACT CTCCAATGCG GGCGCCCGCT ATACGCAGTT TCGGTCTAAT CTGCGCTATC TTCACGAACT CGATTGGGAT GCCATCGCCG CGACGGATTT CCGTGATTCC GATGTCAAGG AGGGGAAACA GGCAGAATTC CTTGTCCATG GCTTCTTTCC GTTCGATCTC GTTGAGCGGA TTGGTGTGCA TCGTGCTAAT ATCTGGAATA AAGTACGCAG CGTGCTGGCA GGGAGCGGCT ATACTCCTCG CGTTGAAGTG CGCGACGACT GGTATTTTTG A
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Protein sequence | MARIMIPTFP KKPIPENPKI YHITHVDNIR NIVSTGGLLS DARILQQGGP TQMIGLSNIK RRRIEELEVR CHPGTKVGEY VPFYFCPRSI MLYVIHRADH PELMYRGGQD SIAHLEADLH QVVDWADNNG VRWAFSLSNA GARYTQFRSN LRYLHELDWD AIAATDFRDS DVKEGKQAEF LVHGFFPFDL VERIGVHRAN IWNKVRSVLA GSGYTPRVEV RDDWYF
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