Gene RoseRS_0271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0271 
Symbol 
ID5207206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp343703 
End bp345277 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content65% 
IMG OID640593900 
ProductD-3-phosphoglycerate dehydrogenase 
Protein accessionYP_001274656 
Protein GI148654451 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID[TIGR01327] D-3-phosphoglycerate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.353808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000123013 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGACCGCA TTCTTGTGAC TGAGCCGATT GCCGAGGAAG GGCTTGCCCG TCTCCGTGCC 
GCAGCACACG TCGATGTGCG CACCGACCTG GACAAAGCAG GTCTGATCGC CATTCTTCCC
GAATACGACG CACTCATCGT CCGCAGCGCC ACCAGAGTCA CCGCCGAGGT GCTGGCGGCA
GGAACCCGTC TGCGCGTCGT CGGGCGCGCT GGAACCGGGG TCGATAATAT CGATCTCGAA
GCCGCCACCC GCCAGGGTAT TATGGTTGTT AACGCGCCCG CCTCGAACAG CGTCGCCGTG
GCGGAACTGA CGATTGCGCT CATCCTGAGT CTGGCGCGTC ATATCCCGCA GGCGCACAGT
TCAGTCGTGG CGGGAAAGTG GGAGCGCAAC CGCTTCATGG GTTTCGAGGT GCGCAACAAG
ACGCTGGGGT TAGTTGGGTT GGGTCGGATC GGCGCCGAAG TTGCACGTCG CGCGCGTGGG
CTGGAAATGC ACGTCGTCGC CTACGATCCG GTCGTCTCCA CCGAACGCGC CGCCCAACTC
GGCGCGACCC TCGCGCCGCT CGAAGAAGTC CTGGCACAGG CGGATATTGT CTCGCTGCAC
GTGCCGCTGA TCGATGCCAC GCGCAACATG ATCGATGCAG CGCGTCTGGC GCAGATGAAA
CGCGGTGCGT ACCTGATCAA CGCCGCGCGC GGCGGCGTCG TGGACGAGGC GGCGCTGCTC
GAAGCCATCG AAAGCGGTCA TCTCGCCGGA GCTGCGCTCG ATACTTACTC GACCGAGCCG
CCGGTCGGCA ATCCGCTGGT CGGTCATCCG CGCGTGATCA CCCTCCCCCA TCTCGGCGCA
TCCACCGTCG AAGCGCAGGC ATTGACCGGC GTCGATGTCG CTGAGGGGGT TCTGGTGGCG
CTGGCGGGCG GGTCGCCGCA CTACGCCGTG AATGCCCCCT ACATTCCGCC TGAGCATCGC
GGTCTGGTTG CGCCCTATGT CGATCTGGGG CGACGCCTGG GAATGCTCTG CGCCGGTCTG
GTGCGCGATC CGGTGCGCAA CTTCGAGATC GAGTATCGCG GTGAACTGGC AACCGTCGAT
ACCACGCCGG TGCGCCTGGC AGTCCTGCAA GGGCTGCTTG CCACAACCCG CGAAGAGCGC
GTCACGCCGG TCAACGCGCC GTTGCTGGCG CGCGAACTGG GGTTGAAATT GACCGAGTTC
TCAACCGACG AGGCAGGAAA CTTTTCCGGG CTGCTGGTGC TGCGCGCCCA GACGAGCGAC
GGCGCGCGCG AGTTTGCCGG GACAATTCTG CGCGGTGAAC CGCACGTCGT CGAAGCGGAC
GGTTTTTGGG TCACGTTTGT GCCTGAAGGT CCGATGCTCT TTACCTACCA TCGTGACCGC
CCCGGTATGA TCGGCAAGGT CGGCACCCTC CTGGGCGAAG CCGATGTCAA CATCGCCAGC
ATGGATGTGG GGCGCCTGGC GCCGCGCGAG CAGGCGATGA TGGTGTTGCG CCTGGACGAC
CCGGTGCCGC CGCATGTCAT CGCGCGTCTG CGTGAAGAAC CGGATATCCA GCACGCGACG
ACGTTGATCA TTTAG
 
Protein sequence
MDRILVTEPI AEEGLARLRA AAHVDVRTDL DKAGLIAILP EYDALIVRSA TRVTAEVLAA 
GTRLRVVGRA GTGVDNIDLE AATRQGIMVV NAPASNSVAV AELTIALILS LARHIPQAHS
SVVAGKWERN RFMGFEVRNK TLGLVGLGRI GAEVARRARG LEMHVVAYDP VVSTERAAQL
GATLAPLEEV LAQADIVSLH VPLIDATRNM IDAARLAQMK RGAYLINAAR GGVVDEAALL
EAIESGHLAG AALDTYSTEP PVGNPLVGHP RVITLPHLGA STVEAQALTG VDVAEGVLVA
LAGGSPHYAV NAPYIPPEHR GLVAPYVDLG RRLGMLCAGL VRDPVRNFEI EYRGELATVD
TTPVRLAVLQ GLLATTREER VTPVNAPLLA RELGLKLTEF STDEAGNFSG LLVLRAQTSD
GAREFAGTIL RGEPHVVEAD GFWVTFVPEG PMLFTYHRDR PGMIGKVGTL LGEADVNIAS
MDVGRLAPRE QAMMVLRLDD PVPPHVIARL REEPDIQHAT TLII