Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0271 |
Symbol | |
ID | 5207206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 343703 |
End bp | 345277 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640593900 |
Product | D-3-phosphoglycerate dehydrogenase |
Protein accession | YP_001274656 |
Protein GI | 148654451 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.353808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000123013 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGACCGCA TTCTTGTGAC TGAGCCGATT GCCGAGGAAG GGCTTGCCCG TCTCCGTGCC GCAGCACACG TCGATGTGCG CACCGACCTG GACAAAGCAG GTCTGATCGC CATTCTTCCC GAATACGACG CACTCATCGT CCGCAGCGCC ACCAGAGTCA CCGCCGAGGT GCTGGCGGCA GGAACCCGTC TGCGCGTCGT CGGGCGCGCT GGAACCGGGG TCGATAATAT CGATCTCGAA GCCGCCACCC GCCAGGGTAT TATGGTTGTT AACGCGCCCG CCTCGAACAG CGTCGCCGTG GCGGAACTGA CGATTGCGCT CATCCTGAGT CTGGCGCGTC ATATCCCGCA GGCGCACAGT TCAGTCGTGG CGGGAAAGTG GGAGCGCAAC CGCTTCATGG GTTTCGAGGT GCGCAACAAG ACGCTGGGGT TAGTTGGGTT GGGTCGGATC GGCGCCGAAG TTGCACGTCG CGCGCGTGGG CTGGAAATGC ACGTCGTCGC CTACGATCCG GTCGTCTCCA CCGAACGCGC CGCCCAACTC GGCGCGACCC TCGCGCCGCT CGAAGAAGTC CTGGCACAGG CGGATATTGT CTCGCTGCAC GTGCCGCTGA TCGATGCCAC GCGCAACATG ATCGATGCAG CGCGTCTGGC GCAGATGAAA CGCGGTGCGT ACCTGATCAA CGCCGCGCGC GGCGGCGTCG TGGACGAGGC GGCGCTGCTC GAAGCCATCG AAAGCGGTCA TCTCGCCGGA GCTGCGCTCG ATACTTACTC GACCGAGCCG CCGGTCGGCA ATCCGCTGGT CGGTCATCCG CGCGTGATCA CCCTCCCCCA TCTCGGCGCA TCCACCGTCG AAGCGCAGGC ATTGACCGGC GTCGATGTCG CTGAGGGGGT TCTGGTGGCG CTGGCGGGCG GGTCGCCGCA CTACGCCGTG AATGCCCCCT ACATTCCGCC TGAGCATCGC GGTCTGGTTG CGCCCTATGT CGATCTGGGG CGACGCCTGG GAATGCTCTG CGCCGGTCTG GTGCGCGATC CGGTGCGCAA CTTCGAGATC GAGTATCGCG GTGAACTGGC AACCGTCGAT ACCACGCCGG TGCGCCTGGC AGTCCTGCAA GGGCTGCTTG CCACAACCCG CGAAGAGCGC GTCACGCCGG TCAACGCGCC GTTGCTGGCG CGCGAACTGG GGTTGAAATT GACCGAGTTC TCAACCGACG AGGCAGGAAA CTTTTCCGGG CTGCTGGTGC TGCGCGCCCA GACGAGCGAC GGCGCGCGCG AGTTTGCCGG GACAATTCTG CGCGGTGAAC CGCACGTCGT CGAAGCGGAC GGTTTTTGGG TCACGTTTGT GCCTGAAGGT CCGATGCTCT TTACCTACCA TCGTGACCGC CCCGGTATGA TCGGCAAGGT CGGCACCCTC CTGGGCGAAG CCGATGTCAA CATCGCCAGC ATGGATGTGG GGCGCCTGGC GCCGCGCGAG CAGGCGATGA TGGTGTTGCG CCTGGACGAC CCGGTGCCGC CGCATGTCAT CGCGCGTCTG CGTGAAGAAC CGGATATCCA GCACGCGACG ACGTTGATCA TTTAG
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Protein sequence | MDRILVTEPI AEEGLARLRA AAHVDVRTDL DKAGLIAILP EYDALIVRSA TRVTAEVLAA GTRLRVVGRA GTGVDNIDLE AATRQGIMVV NAPASNSVAV AELTIALILS LARHIPQAHS SVVAGKWERN RFMGFEVRNK TLGLVGLGRI GAEVARRARG LEMHVVAYDP VVSTERAAQL GATLAPLEEV LAQADIVSLH VPLIDATRNM IDAARLAQMK RGAYLINAAR GGVVDEAALL EAIESGHLAG AALDTYSTEP PVGNPLVGHP RVITLPHLGA STVEAQALTG VDVAEGVLVA LAGGSPHYAV NAPYIPPEHR GLVAPYVDLG RRLGMLCAGL VRDPVRNFEI EYRGELATVD TTPVRLAVLQ GLLATTREER VTPVNAPLLA RELGLKLTEF STDEAGNFSG LLVLRAQTSD GAREFAGTIL RGEPHVVEAD GFWVTFVPEG PMLFTYHRDR PGMIGKVGTL LGEADVNIAS MDVGRLAPRE QAMMVLRLDD PVPPHVIARL REEPDIQHAT TLII
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