Gene RoseRS_0241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0241 
Symbol 
ID5207176 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp304959 
End bp305784 
Gene Length826 bp 
Protein Length274 aa 
Translation table11 
GC content54% 
IMG OID640593871 
Producttransposase, IS4 family protein 
Protein accessionYP_001274627 
Protein GI148654422 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.458028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0118803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGAC GTGCACGTCG ATCCTATCCA ACCAAGGATG CGACCGATCT GACCGATGCG 
CAATGGGCCG CCATCGCGCC ACTCGTCATC ACCCCGTCGC CCAACGGCGG GCGTCCGACC
GAAATTGATC GCCGCGCGAT CGTCAACGCC CTGCTGTACA AACATCGCAC GGGCTGTCAA
TGGCGCATGC GTCCAAAAGA TTTTCCGCCA ATGAGCTCTG TTCGGTACTA TTTCGACAAA
TGGAATCGTG ATGGAACATT CATCAAAATC AATGATACCT TGCGCAAACT GGCGCGACAA
GCGTTGAATC GCGACCCGGA GCCGTCCATC AGCGTCCTGG ACTCCCAATC CGTCAAAACG
ACCGAAGCAG GCGGAGAACG CGGCGACGAT GGGGGAAAAA AAGGTCAACG GGCGCAAACG
GCAATTCTGG GTTGATACAA ATGGGTTCTT GCTGCGCGTG CTCGTCCATC CGGCAGACAT
TTCTGATACC GAAGGCGCGG AGTGGCTTTT GGCCGCGCAT CATCAATCGT TTCCTCGGAT
GCAAGAAATT CGGGTGGATG AAGGATACAA ACAAGGGTTA AATGAATGGC TGCAACAGAA
CACGACGATA CGCCTGAATG TCATCGAAAA ACCGCCTGGA CAAAAGGGAT GTGCGGTCAT
CCCGAAGCGA TGGGTGGTAG AACGCTCGAT TGCGTGGGCG GGACGCAATC GGTTGTTGCG
GCGAATAATT ATTCGCCGCA ACAACCGCAA CCCAGAATCA AGCGAAGCCT TTCTTTATCT
CGGTTCTATT GCAATGCTCC TGAATAGGCT TTATCCGAGG TGTTAG
 
Protein sequence
MPRRARRSYP TKDATDLTDA QWAAIAPLVI TPSPNGGRPT EIDRRAIVNA LLYKHRTGCQ 
WRMRPKDFPP MSSVRYYFDK WNRDGTFIKI NDTLRKLARQ ALNRDPEPSI SVLDSQSVKT
TEAGGERGDD GGKKVNGRKR QFWVDTNGFL LRVLVHPADI SDTEGAEWLL AAHHQSFPRM
QEIRVDEGYK QGLNEWLQQN TTIRLNVIEK PPGQKGCAVI PKRWVVERSI AWAGRNRLLR
RIIIRRNNRN PESSEAFLYL GSIAMLLNRL YPRC