Gene RoseRS_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0225 
Symbol 
ID5207160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp277993 
End bp278811 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content65% 
IMG OID640593855 
Productalpha/beta hydrolase fold 
Protein accessionYP_001274611 
Protein GI148654406 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.701432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAA CACCAGTTCG TTCGCCGACT GAAGCATTCT GTGCAACAAG CCGTCTGCGC 
TACAGCGTTG CCGGTGGCGG TGAACGTGGA GTGGTGCTGT TGCACGGTTG GGGCGACACA
AAAGAGATCT GGCACGCCAC ATGCGCCGTG CTGTCATCGC GCGCCCGCGT TTTTGCCCCC
GATCTCCCCG GTCACGGCGG CTCGCCGCTC GACGGCGCCG AACGGATGCA GCAGGTCGCA
GAGCGCGTTG CAACGTTCTG CACAGCGCAC GGGTTGACCT CGTTTGCGCT TGTGGGGCAC
TCCATGGGGG GCAATGTTGC ACTGGAACTG ACGCTGACGC ATCCGCAGAT GGTCGAACGG
CTGGCGCTGG TGGCGCCTGC GGCGCTGGGG ACGGCAATGC CGCCCTACAC GCGCCTGTTC
TTGCAGGACG GATATGGGTG GGCAGCCCTG CGCGCATCGC TCCTCTTCTA CCGCAGGGTG
GATGCGCTGG CGCGCCAGTG GCGACCGATC ACCGCCATGA CCCGCATCCT TCCCGGAGTC
CGTCGCGCAG CATTCGCTGC CCATCACGAC CCGGAAGGTT TGCATCGTCT GCTGAATGCG
CTGTTCGCCA ATTCGCTCGA CGGTCGACTG GACCGGGTGC GCGTGCCAAC CCTGGTGATC
AACGGCGATC TCGATGCCGT CGTGCCGTCC CGTCTGTCGC AGCGCGTGGC GGCAGCTATT
CCGGAAGCGC GCTTCGCGCT GGTGCGGGGA GCGCTGCACC ATCCGATGGA CGAGCAACCG
GAAGCGTTTC AGCGTCTGTT GCTGGAGTTT CTGACCTGA
 
Protein sequence
MIETPVRSPT EAFCATSRLR YSVAGGGERG VVLLHGWGDT KEIWHATCAV LSSRARVFAP 
DLPGHGGSPL DGAERMQQVA ERVATFCTAH GLTSFALVGH SMGGNVALEL TLTHPQMVER
LALVAPAALG TAMPPYTRLF LQDGYGWAAL RASLLFYRRV DALARQWRPI TAMTRILPGV
RRAAFAAHHD PEGLHRLLNA LFANSLDGRL DRVRVPTLVI NGDLDAVVPS RLSQRVAAAI
PEARFALVRG ALHHPMDEQP EAFQRLLLEF LT