Gene RoseRS_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0193 
Symbol 
ID5207128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp239267 
End bp239779 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content61% 
IMG OID640593823 
Producthypothetical protein 
Protein accessionYP_001274579 
Protein GI148654374 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00635548 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00169669 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCGCAAC GCAGGTGGCG TTACCGGGTT CGTCAATTCG TCACCGCCCT GATCGCCAGT 
ATTCGTCTGG ACGAACGCGT CCTGCTCGTG TGCACGTTGA GCGATCCGCA GCTGCTGCTC
TTTGAGCGTA TGCCGCGGTT CGCTCAACGG CATAGCCTCG ATGTCTATCA CGCACTGGTG
CGCGCCGGTC ACACCGATCC ACATCTGCTC CAGGCGGCGT TGTTGCACGA TTGCGGAAAG
GTTGATCCGA ACGGTCGCAC CATCCCCCTG ATATACTATG CCATTATTGT GCTGCTGCAA
CAGTATGCTC CCGATCTGTA CCAGCGCGCC GCGCGCAATG GTCGCGGTCT GCTCTACCCG
TTCGCGCTTC ACGCCACCCA CGAGCAGCGC AGCGTCATCT ACGCCCGGGC GGCAGGCAGT
CATCCAGAGG TCGTGCAGAT CCTGAGCGAC TACGCCGAAC GACGCGCAAC GCCGTTCACC
GACGCACTAC GCGCTGCTGA TGATACGAAT TGA
 
Protein sequence
MAQRRWRYRV RQFVTALIAS IRLDERVLLV CTLSDPQLLL FERMPRFAQR HSLDVYHALV 
RAGHTDPHLL QAALLHDCGK VDPNGRTIPL IYYAIIVLLQ QYAPDLYQRA ARNGRGLLYP
FALHATHEQR SVIYARAAGS HPEVVQILSD YAERRATPFT DALRAADDTN