Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0193 |
Symbol | |
ID | 5207128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 239267 |
End bp | 239779 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640593823 |
Product | hypothetical protein |
Protein accession | YP_001274579 |
Protein GI | 148654374 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00635548 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00169669 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCGCAAC GCAGGTGGCG TTACCGGGTT CGTCAATTCG TCACCGCCCT GATCGCCAGT ATTCGTCTGG ACGAACGCGT CCTGCTCGTG TGCACGTTGA GCGATCCGCA GCTGCTGCTC TTTGAGCGTA TGCCGCGGTT CGCTCAACGG CATAGCCTCG ATGTCTATCA CGCACTGGTG CGCGCCGGTC ACACCGATCC ACATCTGCTC CAGGCGGCGT TGTTGCACGA TTGCGGAAAG GTTGATCCGA ACGGTCGCAC CATCCCCCTG ATATACTATG CCATTATTGT GCTGCTGCAA CAGTATGCTC CCGATCTGTA CCAGCGCGCC GCGCGCAATG GTCGCGGTCT GCTCTACCCG TTCGCGCTTC ACGCCACCCA CGAGCAGCGC AGCGTCATCT ACGCCCGGGC GGCAGGCAGT CATCCAGAGG TCGTGCAGAT CCTGAGCGAC TACGCCGAAC GACGCGCAAC GCCGTTCACC GACGCACTAC GCGCTGCTGA TGATACGAAT TGA
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Protein sequence | MAQRRWRYRV RQFVTALIAS IRLDERVLLV CTLSDPQLLL FERMPRFAQR HSLDVYHALV RAGHTDPHLL QAALLHDCGK VDPNGRTIPL IYYAIIVLLQ QYAPDLYQRA ARNGRGLLYP FALHATHEQR SVIYARAAGS HPEVVQILSD YAERRATPFT DALRAADDTN
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