| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0191 |
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| Symbol | |
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| ID | 5207126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 237364 |
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| End bp | 238572 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640593821 |
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| Product | RpoD family RNA polymerase sigma factor |
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| Protein accession | YP_001274577 |
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| Protein GI | 148654372 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000166048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00192271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAATCAA TGCAAGAAGG TAGACACATG GCCACCGAGA TCGTGGAGCA GACACAACAG
GCGTGGGCGC AAACCCTCGA GTATCTGCTG GAAATCGGGC GCACACGCGG GTTCCTTACC
TACAACGAAA TCCTTGAAGC GTTACCGCAA CCTGAGCACC ACATTGCTGA TGTTGATCAA
CTCTATGCTT CCCTTCAAGC AGAGGGCATT CGCGTCGTCG AAACCCCGCT CGACATCCAC
GACAACGGTT CGACCGGCGA CGATGAGTTG CTGGCGGATA TGCCCGACCT GACCGATGTG
GCGCTCGATG ATCCGGTCCG CATGTATTTG CAGGAGATCG GTCAGGTTCC ACTCCTGTCG
GCGGAACAGG AAGTCATGCT GGCAAAGGCG ATGGAAGCCG GTCACCGTGC GCGTCGCGCG
CTCGAACGCG AAGAGTACAG CTCCTGGCAG GAGCGCGTGA TGTACGAGCA GCAGGTCGCG
CAGGGGAATG AGGCGCGCCA GCACCTGATC CAGGCCAACC TGCGACTGGT CGTTTCGATT
GCCAAGAAGT ACACATCGTA TGGGCTGACG ATGATGGACC TGGTGCAGGA GGGCAATATC
GGTCTCATGC GCGCAGTCGA AAAGTTCGAC TATACCAAAG GGCACAAATT CTCCACGTAT
GCCACATGGT GGATCCGCCA GGCGATCACC CGCGCCATCG CCGATCAGAG CCGCACCATT
CGTCTGCCGG TGCATATGGG TGAGGCGATC AGCCAGGTGA AGCGTACCTC GCACAAACTC
CAGCAGACGA TGCAGCGCGA ACCTACGCCG GAAGAGATCG CCGACGCAAT GGGCATCAGT
TCGACGAAGG TACGCCGCAC GCTGGAGGCG TCGATGCACC CGCTCTCGCT CGAAATGCCG
GTCGGGCAGG AAGGTGAAGG GCGGATGGGC GACTTTATCG AAGACGACCG GATCTCGACG
CCGGCTGAGG CTGCTGCGGC TTCGATGTTG CGTGAGCAAC TTGAAGAGGT GTTGCAGAAG
CTGCCGGAGC GCGAGCGCAA GATTATTCAG TTGCGCTACG GCTTGAAAGA TGGGCGGTAT
CGCACGCTTG AAGAGGTCGG CATGGAGTTT GGCATTACGC GCGAACGCAT CCGCCAGATC
GAAGCGGTGG CGCTTCGAAA ATTGCGCCAT CCGCACCTCG GTAAGAAGTT GCGCGGCTAT
CTCGATTGA
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| Protein sequence | MKSMQEGRHM ATEIVEQTQQ AWAQTLEYLL EIGRTRGFLT YNEILEALPQ PEHHIADVDQ
LYASLQAEGI RVVETPLDIH DNGSTGDDEL LADMPDLTDV ALDDPVRMYL QEIGQVPLLS
AEQEVMLAKA MEAGHRARRA LEREEYSSWQ ERVMYEQQVA QGNEARQHLI QANLRLVVSI
AKKYTSYGLT MMDLVQEGNI GLMRAVEKFD YTKGHKFSTY ATWWIRQAIT RAIADQSRTI
RLPVHMGEAI SQVKRTSHKL QQTMQREPTP EEIADAMGIS STKVRRTLEA SMHPLSLEMP
VGQEGEGRMG DFIEDDRIST PAEAAAASML REQLEEVLQK LPERERKIIQ LRYGLKDGRY
RTLEEVGMEF GITRERIRQI EAVALRKLRH PHLGKKLRGY LD
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