Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0168 |
Symbol | |
ID | 5207103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 211514 |
End bp | 212743 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640593798 |
Product | aminotransferase, class V |
Protein accession | YP_001274554 |
Protein GI | 148654349 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.925051 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCTAC AAAGCGAGGA GTATGTGACT GACCGATTGA TCTACCTTGA TCACGCGGCA ACGACGCCGG TCGATCCCGT GGTGCTCGAG GCGATGATCC CCTATTTCAC CACGCACTTT GGCAATCCAT CGAGCATCTA TCGCATTGGA CGCGCTGCAC TGCATGCACT CGACGAAGCG CGTGATCAGA TTGCGTCGAT CCTGGGAGCA TCGCCGCGTG AGATTATTTT TACCGGCAGT GGTTCGGAGA GCGATAACCT TGCGATTCGT GGCGTCGCAC TGGCGCAACG CCAGGCAGGA CGGGGATCGC ACATTATTAC CAGCGCCATT GAGCATCACG CGGTGCTGCA TACCGTCGAA CATTTGCAAG CGTTTGGGTT CGAGGCGACC ATCCTGCCGG TCGATCCCAA AGGTCTGGTG CAGCCGGAAT ACCTGCGCGC CGCGTTGCGT CCGGACACGG TGCTGGTATC GATCATGTAC GCCAACAACG AAATCGGCAC GATCCAGCCG ATTGCGGAAC TGGGCGCCAT CTGTCGCGAA CGCGGCATTC CTTTCCACAC CGATGCCGTC CAGGCGCCCG GTGCGTTACC GCTCGACGTG CGTGCGCTCA ACGTCGATCT TATGACCATT GCTGCGCACA AGTTCTACGG TCCCAAAGGC GTGGGTGCGC TCTACGTTCG CCGGGGCACA CCGCTCCTGC CGCAGATCAC CGGCGGTGGA CAGGAACGAC GACGACGCGC TGGCACCGAG AATGTGCCCG GCATCGTCGG CATGGCGACG GCGCTGCGCC TGGCGGAAGA ACGCCGCGCG CACGACAGCG CCCACTGTGC GCGTCTGCGC GACCGGTTGG TGGCGGGCAT TCTGGAACGT GTGCCGGGAT CGCGTCTCAA TGGTCATCCG ACCCAACGAC TGCCCAATAA TGCCAGTCTT TCGTTCGAGG GTGTCGAGGG TGAAAGCATC CTTCTGTTGC TCGATCAGCA CGGGATTGCT GCTTCGAGCG GCTCTGCCTG CACCAGTGGA TCACTGGAGC CATCGCACGT GTTGATCGCC CTGGCTCGCG CTTCCGGGAC GGAACGTGCG CCGGAAATTG CGGCTGCGCT CCCCGGCGCG GTGCGATTCA CTTTTGGGCG TGAGAACACC GATGCCGATG TCGATGCGGT TCTGGAGATG TTGCCGGGTA TTGTTGCACA ACTGCGGGAA ATGACGGTAA CATCGCAGGG AGGCGTATGA
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Protein sequence | MSLQSEEYVT DRLIYLDHAA TTPVDPVVLE AMIPYFTTHF GNPSSIYRIG RAALHALDEA RDQIASILGA SPREIIFTGS GSESDNLAIR GVALAQRQAG RGSHIITSAI EHHAVLHTVE HLQAFGFEAT ILPVDPKGLV QPEYLRAALR PDTVLVSIMY ANNEIGTIQP IAELGAICRE RGIPFHTDAV QAPGALPLDV RALNVDLMTI AAHKFYGPKG VGALYVRRGT PLLPQITGGG QERRRRAGTE NVPGIVGMAT ALRLAEERRA HDSAHCARLR DRLVAGILER VPGSRLNGHP TQRLPNNASL SFEGVEGESI LLLLDQHGIA ASSGSACTSG SLEPSHVLIA LARASGTERA PEIAAALPGA VRFTFGRENT DADVDAVLEM LPGIVAQLRE MTVTSQGGV
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