| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0156 |
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| Symbol | |
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| ID | 5207089 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 200194 |
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| End bp | 202012 |
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| Gene Length | 1819 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | 640726302 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00432374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.387266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGC TCATTGAAGT TCACGATGTC GTCAAAATCT ATCGGATGGG GGATGTAGAG
GTGCATGCGC TGCGCGGCGT GTCACTCGCC ATCGATGAAG GCGAGATGGT CGCTATCATG
GGTCCGTCCG GCAGCGGCAA AAGCACCCTG ATGAATAGAC ATCATCAAGA TTTAGTGATA
TACTATTTTT GTACAATCTG AAAATGGAGA AAAACGATGT GTAAGTATCG ATCCATTATC
GAAAATCCGG AGAAATTACG CTCTATGACC GGACTGACCG TTGAAGAGTT CCACGCGCTG
GTTCCGATCT TCCACGCCGC ATTTGAAGCG TATATGAAAC GTCGCACGAT TGATGGCCGC
GTCCGATATT GTCGTCGCTA CGTCTCGTAT GCAAACTCGC CGCTTCCGAC AACAGAAGAT
AAATTGCTCT TTATTTTGAC CTACTTAAAA CAAAACCCAA CGCAAGTGAT GCACGGACAC
CTCTTTCAAA TGAGCCAATC AAACGTAAGC AAATGGGTGC ATCTTTTGCA CGGAGCGCTG
AACTATGCGC TTTCACAGCA AAATCTCCTG CCTGCGCGCA CTGCCGACGA CCTGGCGAGG
CGATTGCAGG AAGAACCGTC GTGTGAAGAA CCGTCGTGTG AAGAACCGTC GTGTGAAGAA
CCGTCGTGTG AAGAACCGTC GTGTGAAGAA CCGTCGTGTG AAGAACCGTC GTGTGAAGAA
CCGTCGCATG CGACAAAAGC GCCCCCCTTT TTATCCATGA CGGCGTAGAA CGTCCCATTC
GCCGTCCAAG CGACAAAGTC GACCGGGAGT TGTATTACAG CGGTAAGAAG AAACGACATA
CGCTTAAGAA CGTTCTCATC ATTGATGAGT TTGGCTCTAT TCACTTTTTG AGTGACACCT
ACGAAGGAAG GGTCCACGAT AAATGTATTG CGGATGAAGC GGGATACACC CTTCCAAACG
CGAGCATTCT CTATCAAGAC GCCGGATTTC AAGGATTTAC CCTGCCTGGC GTCCAGATTA
TGCAGCCAAA GAAGAAGCCG CGCAATGGAA CCCTCACGCC GCAGGAAAAG GAGGAAAACC
GGCGTATCTC ATCCGTTCGC GTTCGTATTG AACATGTTAT CGGCGATATC AAGCGGTATC
GAATCATTCA CGACATTATC CGCTTCAGTT GTTCCGAATT TCGGGATATG GTCATGGAAA
CATGTTGCGG GCTGCATAAC TTCCGAATTT GGCTGAAACG CAAAAAGCAG TCCAAAAATC
AAAACGAATC TTGATGAAGT CTAATATCCT GGGATGTCTC GATCAACCGA CGAGCGGAAC
CTACCTGCTC GACGGTGTTG ATGTGGGCAG CCTGAACGAT GACGAACTGG CTGCGATCCG
CAACCAGAAG ATCGGATTTG TCTTCCAGCA GTATATGCTG CTGCCGCGAA CCACTGCGTT
GCGCAATGTC GAACTGCCGC TGCTCTACAG CCCCGGCAAC GGGCTTGATC GCACGGCGCG
CGCACGTGCG GCGCTTGAGG CGGTCGGTAT GGGCGACCGC ATGCACCACA AGCCGAATGA
ACTCTCCGGC GGACAGCAAC AGCGGGTTGC GATTGCGCGC GCGCTGGTCA ACAATCCGCG
CATTATTCTG GCGGATGAGC CGACCGGTGC GCTGGACACG AAGACCGGCG AGGAGATCAT
GGGGATTTTC GAGCGGTTGA ACCGCGAGCG TGGCATTACC GTGATCCTGG TGACTCACGA
GCAAGATGTT GCCCGTCACG CCGAACGGAT CATTCATATG CGTGACGGGC AGATCGCCGA
TGTTACAGCA CGCGTGTGA
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| Protein sequence | |
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