Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0122 |
Symbol | |
ID | 5207055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 145505 |
End bp | 146101 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640593753 |
Product | tripartite ATP-independent periplasmic transporter DctQ |
Protein accession | YP_001274512 |
Protein GI | 148654307 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.591808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTCC TCTTGCGCGT GAGCGATGCT ATCGATGCGC TCAATGAATG GATTGGCAGC AAGACGGCGT ACATTGTCAT GGCGATGGTG GCGATCGGTT TTGTCAACGT TGTTGCGCGC TATGTCGGGC GTTTCATCGG CGTCCGTCTC ACCTCGAACG CCATTATCGA GTTGCAGTGG TATCTCTTCT CGATCATGTT CTTTCTGGGT TTTGCCTATA TTTTGAAGCA CAACCTGAAT GTACGGGTCG ATTTCTGGTA CGCGAACTGG ACCCCACAGC GCCGCGCCCT GATCGATCTC GCCGGAACGC TGCTCTTCCT GATCCCCTTC TGTATCATTG CGATTATTGT GACTTTCAAT CCGGTTATGT TTTCCTGGGG ACGCCTGCCC AACGGCAGGT GGGGACCCTG GGAGATGTCG CCCGATCCTG ATGGTCTCCC ACGGGCGCCG ATCAAGTCGA TGATTATCGT CGCTTTTGTG CTACTCCTTT TGCAGGCGAT CTCCCAGGCG ATCAAATACC TTGCGATTGT GACCAATGCT GTTCGCGCCG AACAGGCGGC GCAGATCGAA GAGTACCATG CACCTGTAGT CGAATAG
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Protein sequence | MQFLLRVSDA IDALNEWIGS KTAYIVMAMV AIGFVNVVAR YVGRFIGVRL TSNAIIELQW YLFSIMFFLG FAYILKHNLN VRVDFWYANW TPQRRALIDL AGTLLFLIPF CIIAIIVTFN PVMFSWGRLP NGRWGPWEMS PDPDGLPRAP IKSMIIVAFV LLLLQAISQA IKYLAIVTNA VRAEQAAQIE EYHAPVVE
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