Gene RoseRS_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0087 
Symbol 
ID5207020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp99758 
End bp100096 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content67% 
IMG OID640593719 
Producthypothetical protein 
Protein accessionYP_001274478 
Protein GI148654273 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0773242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.26212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACG CAACCACAGC ATGGATTACA GCCGCTGGCG GCGCTTTGAT GATCGTGCTG 
GCGGTTTTGA TGCCCCGGCT TCGCCTGCGC CTCGGTGGAC GACCGTGGGA CGAGACGTTC
CGCGATCCGC GCCTGCGCCG CATTGCGCGC ATCCAGGAGC GCCTGGCGCA GGGTTCGCTG
GGAGCGATGG GCGCAGGGTT CCTGGTGTCC GGCGCCGGTG TTCTGTTGCG CCTTCCCCCT
GTGCCGGCGC AACTCGTTGT GTCGATCTGC TACGGACTGG CGCTCGCCGG ACTCGTGGCG
CAGGTGGCGT TGATCATTCG CTCGCGGCGG ATCGAGTGA
 
Protein sequence
MADATTAWIT AAGGALMIVL AVLMPRLRLR LGGRPWDETF RDPRLRRIAR IQERLAQGSL 
GAMGAGFLVS GAGVLLRLPP VPAQLVVSIC YGLALAGLVA QVALIIRSRR IE