| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0077 |
|---|
| Symbol | greA |
|---|
| ID | 5207010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 92146 |
|---|
| End bp | 92619 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640593709 |
|---|
| Product | transcription elongation factor GreA |
|---|
| Protein accession | YP_001274468 |
|---|
| Protein GI | 148654263 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0782] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00207801 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.174892 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA AACCAGCATA CCTCACCCGT GATGGGCGCG CCAGGCTCGA AGCCGAGTTG
GAAGAGCTTG TCACCAAGGG CCGCAAAGAG ATTGCCGAGC GTATCAACGC CGCAAAAGAA
CTTGGCGACA TCTCCGAAAG CGGCGAATAC GAGGATGCCA AAAACCAGCA GGCTCATCTC
GAAGGTCGTA TCCGCGAGAT CAAGAGCATT CTCGCCCGTG CTCAGATAAT CGACGAAGAG
AACGGCGACA ATCACGAGGT TCGCATTGGT TCGCGCGTCA CAGTACGTAT CGACGGCGAA
GACGGCGAAG AAACCTGGAC GATTGTCGGC AGCACTGAAG CCAAACCGAG CGAAGGCAAG
ATATCGAATG AGTCGCCGAT CGGTTCGGCG CTCCTCGGCA AACGCCCGCG TCAGAAAGTA
ACGGTAGAGA CCCCTTCTGG CACCATGAAA CTTACCATCG TCGATATCCA GTAG
|
|---|
| Protein sequence | MSDKPAYLTR DGRARLEAEL EELVTKGRKE IAERINAAKE LGDISESGEY EDAKNQQAHL
EGRIREIKSI LARAQIIDEE NGDNHEVRIG SRVTVRIDGE DGEETWTIVG STEAKPSEGK
ISNESPIGSA LLGKRPRQKV TVETPSGTMK LTIVDIQ
|
|---|
| |