Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0076 |
Symbol | |
ID | 5207009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 89941 |
End bp | 91683 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640593708 |
Product | phosphotransferase domain-containing protein |
Protein accession | YP_001274467 |
Protein GI | 148654262 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1796] DNA polymerase IV (family X) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0741749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.105314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTCGC GCCTGACGAA CCACGAAGTC GCTGAGATGT TCAGCGCTAT TGCTGACCTG ATGGAGATCC TGGACGAGGA TCGGTTCCGC GTTCAGGCGT ATCGTCGCGC CAGCGACGCC ATCCGCGATC TGCCAGCGCC ACTGGCGACA TACCGCGACC GCGGTGAACT GGAGGCAATT CCCGGAGTCG GCAAGGCGAT TGCCGGGAAG ATCAGCGAGT TGCTCGACAC AGGTGAGTTG CAGTACTACA ACCGCCTTCA GGAGAAGGCG CCGCCCGGTG TGCGCGAGTT GCTGCGCGTC CCCGGCGTCG GTCCGCGTAC TGCCGGGCGT CTCTACCGCG AACTTGGGAT TACCAGCCTG GCGGAACTGA AACGTGCTGC TGAGGAAGGA CGCCTGGCGA CGCTCAAGGG TTTCGGCGCA AAGATGATCG AAGGCATTCT CCAGGGTATC AGTGTTGCGG AGCGACAGGA GCGACGGATG CTGCTGGCGC ACGCGCTCGA AACCGCTGAG GAGTTGATCC TGGCGCTGCG CACCGCTGCC CCCACACTGC GCCAGGCGAC ATACGCTGGA AGTTTGCGTC GTGGACGCCC GACCGTCGGT GATCTCGACA TCCTGGTAGC CGCCGATGAT GCTCCTGCTG TCGTCCGTGC CTTTACAACG CTGCCACTCG TGGCGCGGGT CGAGTCGGCG GGTGACGAAA AAGCCAGCAT TCTGCTCCAT AACGGCACAC AGGCGGATCT GATCGCTGTG CCCCCGGCGC TGTGGGGATC AGCGTTGCAA CACTTCACCG GCAGCAAGGC GCATAATATC CGCTTTCGTG AACTGGCGCT GGCGCGTGGC TCGAGTTTCA GCGAGCATGG ATTCCGCCGC GCCGATGGAA CCGTGTTGAC CTGCGCTACT GAAGAAGAGG TGTATGCCGC CGTCGATCTT CCCTGGATTC CGCCGGAACT GCGCGAGGAC GAGGGAGAGT TCGAGGCGGC GCGCGCCGGT GCGCTGCCGC GCCTGGTCGA ACTGAGCGAT ATTCGCGCCG ATCTCCACAT GCACAGCACC TGGAGCGATG GACGCGCCGA TATTCGTACC ATGGCGGAAG CGGCGCGCGC CCGTGGCTAT TCCCACATCG CTATAACCGA CCACAGCGCA TATATCGGGC TGACCCACGG ATTGGATGCG GAACGGTTGC GCGCGCAACG CCGGGAGATC GCAGCGCTGA ATGCGGCGTA TGCCGCGCAA GGCATTCCAT TTCGCATTCT GTGCGGCGTC GAAGTCGATA TGACGCCCGA AGGATCTCTG GCGCTTCCCG ACGATGTGCT GGCAGAACTC GATATCGTTG TGGCGTCGGC GCACATCCAG TTGCGCCAGT CGCCTGAAGC CGCCACCGAA CGCTTGCTGC GCGCGGTGCG CAATCCGCAC GTCGATATAA TCGGTCATCC GGTGGGGCGG ATGCTCGGAT CGCGCGAGGG AGCGCCGGTC GATATCGATG CCCTGGCGCG TGCAGCAGCC GAACATGGGG TGCTGCTCGA AGTGAACAGT GGACCAACCC GCCTCGACCT GGAGGGTCCG GCGGTCCGGC GCGCGCTGGA ACTGGGTGCG ACCATTGCGA TCAACAGTGA TGCGCACCAT CCCGACAATC TGGACTGGAT CCGGTTCGGG GTCATCACCG CACGGCGGGG TTGGGCGGGC GCTGCGCAGG TAGCGAACAC CTGGAGTTTC GAGGCGCTTC AGGAGTGGTT GCGCCGACAT TGA
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Protein sequence | MMSRLTNHEV AEMFSAIADL MEILDEDRFR VQAYRRASDA IRDLPAPLAT YRDRGELEAI PGVGKAIAGK ISELLDTGEL QYYNRLQEKA PPGVRELLRV PGVGPRTAGR LYRELGITSL AELKRAAEEG RLATLKGFGA KMIEGILQGI SVAERQERRM LLAHALETAE ELILALRTAA PTLRQATYAG SLRRGRPTVG DLDILVAADD APAVVRAFTT LPLVARVESA GDEKASILLH NGTQADLIAV PPALWGSALQ HFTGSKAHNI RFRELALARG SSFSEHGFRR ADGTVLTCAT EEEVYAAVDL PWIPPELRED EGEFEAARAG ALPRLVELSD IRADLHMHST WSDGRADIRT MAEAARARGY SHIAITDHSA YIGLTHGLDA ERLRAQRREI AALNAAYAAQ GIPFRILCGV EVDMTPEGSL ALPDDVLAEL DIVVASAHIQ LRQSPEAATE RLLRAVRNPH VDIIGHPVGR MLGSREGAPV DIDALARAAA EHGVLLEVNS GPTRLDLEGP AVRRALELGA TIAINSDAHH PDNLDWIRFG VITARRGWAG AAQVANTWSF EALQEWLRRH
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