Gene RoseRS_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0075 
Symbol 
ID5207008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp89494 
End bp89910 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content58% 
IMG OID640593707 
Producthistidine triad (HIT) protein 
Protein accessionYP_001274466 
Protein GI148654261 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.850691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.167835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCCG TCTTTTCGCG CATTGTGAGC GGTGAATTGC CGTCAGCCAA AGTGTACGAG 
GATGACGAGA CGCTGGCGTT TATGGATATT AATCCCGCCA GTCGGGGGCA TACGCTGGTG
ATTTGTAAGG AAGAGCACCC CGATATTTTT ACCACGCCCC CTCATCTGGT TGCAGCCGTT
GCGCGGACGG CGCAGAAAGT GGCGCTGGCG CTCCGTGATG CGCTCGATAT CGACGGACTG
AATATTGTTC AGAATAACGG CGCGGCGGCC GGGCAGGTGG TATTCCATTA CCATGTGCAC
CTGATACCGC GCTGGAAGGG TGACCACGTG CTGCGACCCT GGACGCCGCA CCCGGCTGAT
CCGTCTGAAT TGCGCACAAT AGCAGAACGG ATCCGGGCAG CGATAAAGGA AGGTTGA
 
Protein sequence
MPSVFSRIVS GELPSAKVYE DDETLAFMDI NPASRGHTLV ICKEEHPDIF TTPPHLVAAV 
ARTAQKVALA LRDALDIDGL NIVQNNGAAA GQVVFHYHVH LIPRWKGDHV LRPWTPHPAD
PSELRTIAER IRAAIKEG