Gene RoseRS_0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0066 
Symbol 
ID5206999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp83335 
End bp83721 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content57% 
IMG OID640593700 
Productthioesterase superfamily protein 
Protein accessionYP_001274459 
Protein GI148654254 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.287125 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCACC GTCTGATCTG CAAAGTCTAC TACGAAGACA CCGACGCCCT GGGCGTCGTT 
TATCATGCCA ACTATCTAAA ATACATGGAG CGAGCGCGCA GCGAGTATGT CGAACGGTTC
GGCAAGCCGA TCTGGGAGTG GAATCGGTTG GGATACTACA TCGTCGTCTA TGCGATGAAC
ATTCGTTTCA AGCGCGCTGC ACAACTCGGC GACACGCTCG AAGTTGTTTC CGCTTTCAGC
CTGCAATCGC CGTACCGTGG GCTGTTCAAG CAGCGCGTCG AGCGCGATGG ACAGGTGTGC
GTGGAAGCCG ACGTGGAACT GACCTGTCTC GATCCACAAC GCAACCTGCG TGAGTTTCCG
CCGGAGTTTC GTTCCGGGCG CGCCTGA
 
Protein sequence
MEHRLICKVY YEDTDALGVV YHANYLKYME RARSEYVERF GKPIWEWNRL GYYIVVYAMN 
IRFKRAAQLG DTLEVVSAFS LQSPYRGLFK QRVERDGQVC VEADVELTCL DPQRNLREFP
PEFRSGRA