| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0060 |
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| Symbol | |
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| ID | 5206993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 69077 |
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| End bp | 72610 |
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| Gene Length | 3534 bp |
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| Protein Length | 1177 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640593694 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001274453 |
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| Protein GI | 148654248 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.508286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTTC GCCGACAACA GATCCGCGCT GCGGCTTGTG ATGTGCGCCG CTCCTACTAT
GAGCGCGTCG GCAGTGATGA TCTCAACCAT CCGCTGTCGC TTGATACCCT TGTAGAGGAA
ATCTGGGGAT TGACGGTCAT CCGGGATGTG CTCGCCGCCG GTATTCAGGG GAAGGTCGAG
CCGGAACACG ACGTCATCCG GGTGCAGCGC GATCTTTCAC CGACCCGTCA GCGCTTCGTG
ATTGCCCACG AGATTGGTCA TGTGCACCTC GAAGGGTTGG ATGCCGGCCC GTTCCGCGAT
ACCGACGAAA CGCTCGATGA GTGTGCCGCA GGCGCCGACG ATGAGACGGC GGTTCGTTCG
TACAACCGGC GCGAGCGCCG CGAACAGGAG GCGAACCTGT TTGCGCTTGA ATTGCTCGTG
CCGGCGGAGG AACTCTGGCA GGCGGTTCAG CAGGCGGACT GGAGCATTGA GTCGCTTGCA
GCGCAGTTTG CCGTCTCAAC CGATGCCATC CGCGCGCAAC TGGTGAATGT CTGCTGTCTC
GATCCGCTGA CACCACCCGA CGGATCGACC GTTACCCGAC ATACGTCGTT CACGCCGGAC
CCGGAGCAAC AGGCGGCAGT CGATGCGCCG CTGCCGCTGC TGCTTGCGGC TGGACCGGGT
ACCGGGAAGA CGCGCAGCAT TGTGGCGAAG TATGTGTCAC TGGTGCATCA GGGGGTCGAT
CCGGCATCGA TCCTGGCGCT GACGTTTTCG AACAGGGCGG CGGAGGAGAT GCGCGAGCGG
ATCATTGCTG CACTGCGTCA GGCAGCGCCA CGCCTTGCCG GACGTGTGGA GATCAGTACG
TTTCACTCGT GGGGACTGAA TATCCTGCGC ATCTACGGGG CGCGACTGGG GTTGCCGGCG
GATGTGCGGC TTCTCGATAC TGCCGATCTC TTTCTTCTGC TCTCGAAGCG CCTGGACGAT
CTGCGCCTGG CGTATTTCAA AGACCTGCGC GAACCGACCC GTCATCTGGT GACGATTATT
CAGGCGATCA GCCGGATCAA GGATGAACTG TGGTCGCCGG AAGAGTTCGC GCGTGCGGCG
GAGCAGGAAG CGGAGCGTCT GATCGGACAG GCGGAGCAGG ATCATCCTGG CGCTTCGCGC
AAAGCCACCG AAGCGCGCGA GCGCGCGGTG CGACGGGCGA CCGCGTTACG CGAACTGGCA
CAGATCTACC CGCGCTACGA AGCGATCCTG CGCGAGGCGG GCGCACTGGA CTATGGCGAT
CTGATTGTGT TACCGGTGAG GGCGCTGCAC GATCCGGCAA TCGCTGCCGA TCTCCGTCGG
CGTTACCACT ACCTTCTGGT CGATGAATTT CAGGATATCA ACTACGCTTC GGGCGAGTTG
ATCCGGCTGC TCGATGGTGG ACGCGGACGG GTGTGGGCGG TCGGCGATGC CTGGCAGAGC
ATCTATCGCT TTCGCGGCGC ATCGGCGGCC AATCTCGATG AGTTCCTGCA CCATTACCCG
ACGGCGCAGG TTCGCTATCT GACGCGCAAC TACCGCTCGT TGCAACCGAT CCTCGATGCC
AGCGCCGCAG TGATGGTCAG CGATCCTCGC GCTGCAACCC GTCCGTTGCT GCAGGCGCAA
CGCACCGGCG GCGGTCACGC AGTTATCGAA CTAGTTGCAC CGCACAGTCA GGATGAACAT
ACAGCAATTG CGCACGACAT TCTGCGCCGG GCGCGATCCG GTCGAGGCAG GGGATTGCCG
CGCTGCGCCG TGCAACCGTG GATGCTGCAC TGCCGGAAGA TGCGACGTGC ACTGCGTCGT
CCACCCCTGT TCATTCGTCG CTGGCGTTTC CACGACCATG CAGTGCTCTG CCGCACCCAC
GAACAGGCGA GCGCAATTGC TGCTGTGCTC GAAGCGCACG GCATTCCGGT CGATCATCCG
GGCAACGTGT TCGAGGCGTC AGAGGTGAAG GATGTCCTGG CAATCTGCGC CCAGATTGGA
TCGACGAACA GCGCCGGTCT GCTGCGAGCG TTGACGATGC CCGATCACCG TCTTGATCCC
AACGACCTCA ACCTGCTTGT CAGTCTGGCG CGACAGACGC AACAGGCGCT TCCACGCGCC
GCTCGCGATC CGGCGGTTCT TGCGCAGTTG AGTGAAACCG CCCGACAGAC GCTCACACGG
CTTCAGACTA TCGTCGAAAC GCTGGAGAGA GAAGCGGATG TCTGGCACGC GCTGACGACC
TATCTATTCG AGCAGAGTCA GGCGATGCGG CAACGGTTGA ACCGCGCTGC ACGGGGTGAG
TATGCCGCAC AACGGGAACT TGCCACACTC GGTCAGTTGA TTGCGATTGC GCGCAACTTT
GTGCGTCTTG CAACACCGGA GGAGAGCGGT GCGCCGCACT TCATCGCCTA CATTCGCGCA
TTGCGCGCTG CCGGTGTGCA ACCACGACCG TTGATCGGCG GGCAGGCGGA TGCCGTGCGG
GTCATGACCG TCCACGCTGC AAAGGGGCTG GAGTTTCCAA TTGTGTATGT ACCAGGATTG
CAGGAGGGAC GCTTCCCGGC GCGGGGCAAT CAGCGTGGAT TGTCATTGCC TGCCGGTCTT
ATTCGCGGTT CGATCGAGCC TGAAGACCAG GAGGAGCGCT ACCTTCTCTA CGTGGCGATG
ACTCGCGCAC GTGACCGGTT GGTGCTCAGT CGCGCACTGA CGCGGGGCAA TGGCGAGAGA
GCAGCGGAAC GTTCTTCGTT GTTACCCGGC GATGGTGACG GGAATGGCGC ACCCTGGATC
GTTCGATCAG TCATCGGCGG GGCAACCTGT CCGAATCCAG CGCCTGCGAT GCGGCTGCAC
GACACACCAG CGCCGCGTAT GCCGTTACCG GCTTCGAGTA TCGATCTCGA CGGTTGCAAA
CGGCGCTTTC TGTATCAGTA CGTATATCAG TTGTACGACG ATCTTTCGCC GTTTTTACGT
ATGCATCAGG CAATCCGCGA ATGCGTCAGG ACGCTGACGG AACAGGCGCG TGCGGGTGTT
CTGCCTGCCG ATGACGATGC AGTACGATCG CTGGTATTCG GTCAGTTGCA GCGGTACGAA
CTCGACACGG TGCTCTACGC CGAAGACTAT GCCACCGAGA CGTTACAGCA CGTTCAGGTG
GTGTGGAATG ACCTGCGAAG CGGGCGAATC GCGCCTGAGC GGGTAGACCG GCGCGTGCTG
GTGCGGCGAC CGGCTGGGGT GATCGAAGTG CGGATTGATC GAGAGGAGAC GCAGGACGGA
GTGACGCGGT GGGTATGGGT GCGGCCCGGT GCGCCGCGTG GCAATGATCA TCTCTCGGAG
CGTATGATCC TGTATGCGCT GGCGCGTCAG GAGGTGGGTC ATCCTCCTGA TGAACTTGCG
ATTGCCTTTA CGGGAACAGG CGAGACAGTG CGGGTCACGC ACGCTGAGCG GGTACTGGCG
AACCACACGG CAAAGATCGA CCGTCTGCTC GAAGCGATGC ACGAGCGGCG CTGGGAACCG
TCGTTTGGTT CACAGTGCGA CACCTGCCCT TTCAACCTGA TCTGTCCGGT ATAA
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| Protein sequence | MSVRRQQIRA AACDVRRSYY ERVGSDDLNH PLSLDTLVEE IWGLTVIRDV LAAGIQGKVE
PEHDVIRVQR DLSPTRQRFV IAHEIGHVHL EGLDAGPFRD TDETLDECAA GADDETAVRS
YNRRERREQE ANLFALELLV PAEELWQAVQ QADWSIESLA AQFAVSTDAI RAQLVNVCCL
DPLTPPDGST VTRHTSFTPD PEQQAAVDAP LPLLLAAGPG TGKTRSIVAK YVSLVHQGVD
PASILALTFS NRAAEEMRER IIAALRQAAP RLAGRVEIST FHSWGLNILR IYGARLGLPA
DVRLLDTADL FLLLSKRLDD LRLAYFKDLR EPTRHLVTII QAISRIKDEL WSPEEFARAA
EQEAERLIGQ AEQDHPGASR KATEARERAV RRATALRELA QIYPRYEAIL REAGALDYGD
LIVLPVRALH DPAIAADLRR RYHYLLVDEF QDINYASGEL IRLLDGGRGR VWAVGDAWQS
IYRFRGASAA NLDEFLHHYP TAQVRYLTRN YRSLQPILDA SAAVMVSDPR AATRPLLQAQ
RTGGGHAVIE LVAPHSQDEH TAIAHDILRR ARSGRGRGLP RCAVQPWMLH CRKMRRALRR
PPLFIRRWRF HDHAVLCRTH EQASAIAAVL EAHGIPVDHP GNVFEASEVK DVLAICAQIG
STNSAGLLRA LTMPDHRLDP NDLNLLVSLA RQTQQALPRA ARDPAVLAQL SETARQTLTR
LQTIVETLER EADVWHALTT YLFEQSQAMR QRLNRAARGE YAAQRELATL GQLIAIARNF
VRLATPEESG APHFIAYIRA LRAAGVQPRP LIGGQADAVR VMTVHAAKGL EFPIVYVPGL
QEGRFPARGN QRGLSLPAGL IRGSIEPEDQ EERYLLYVAM TRARDRLVLS RALTRGNGER
AAERSSLLPG DGDGNGAPWI VRSVIGGATC PNPAPAMRLH DTPAPRMPLP ASSIDLDGCK
RRFLYQYVYQ LYDDLSPFLR MHQAIRECVR TLTEQARAGV LPADDDAVRS LVFGQLQRYE
LDTVLYAEDY ATETLQHVQV VWNDLRSGRI APERVDRRVL VRRPAGVIEV RIDREETQDG
VTRWVWVRPG APRGNDHLSE RMILYALARQ EVGHPPDELA IAFTGTGETV RVTHAERVLA
NHTAKIDRLL EAMHERRWEP SFGSQCDTCP FNLICPV
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