| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0053 |
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| Symbol | |
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| ID | 5206986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 61097 |
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| End bp | 62230 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640593687 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001274446 |
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| Protein GI | 148654241 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0493156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.337885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACGG ATATGCGCCA GTTTCTCATT GCATCAACCG ATCCTATCGA ACGCCGGCAG
GCGCCAGCGC TCCAGATGAT CCTGATCGCA ATCAGCGTCG CAGCGCTGGT TGCGTTGATC
GTCTTTCTCG CCGTGCTCGG CGTTAACCCA ACCAGCGGAG TTCCTGCCGG TGGCGCCGTG
CTGGTCATGC TGGCCAGTCT GGCAGGGGTG GCGGCGCTGC GTCGCGGCTA CTTTCGCCTG
GCAGTCCTGG TTCCATCCGC CGGTTTAATC GTGGCGGTGT TTTTCGTGAC GGTCATCTAC
GGTTACCCGG CGGCGACGCC TTTCTTGCCG GTGATGTTCA TACCGGTCAT TCTGACCGGT
TTGCTGATCG AAACGCGCCC GTTGCTTCTG ATCGCGGCGG CGAGCGCCCT GATCACGGCG
GCGATCTTCC TGGTCAATCC GGTGATCGCC CCGTTCACAA CAATGGTTCA ACCGCCGGGC
GATCTGACCA TCGTTGCAGT TGCTCTGTTT CTGCTCGTCC TCTTTGTGGT AACGACCATC
ATTGCACTGT TCGGTCCGGT ATTGCGTCAA TCGCTCATAG CAGCGCTGGC GCGTGAGCGA
GAACTCGAAC AGTTGCGCGA TTCGCTCGAA GCAACGGTCA GCGAACGCAC TGCCGGGCTT
CAGGAAGCGC TGCGCACGGT TGAGCAGCGC GAGGCGCAGT TACAGCAGGC GCTCGCCGAT
CTCCAGGCAA GTCAGGTGAC GATTCGTGAG TTAAGCGCGC CGGTTTTGCC GGTGCTGCCA
GGGGTGCTGA TTGCCCCCCT GGTGGGCGCG ATCGATGAAT CGCGCGCAAC CGTATTTGTC
GCCAATGTGT TGCGCGCGGT CGAGCGCGAG CGGGCGCAGC AGGTGATCTT CGATGTGACC
GGCGTCCCGC TGATCGACAC GCAGGTCGCC CGCATGATCC TCCAGGCGGC GGATGCGGTG
CGTTTGCTCG GCGCACAGGT CATCCTGGTC GGGATCCGTC CCGAAGTCGC GCAGACGGTT
GTGGGGCTGG GGGTCGCACT CGACATGAAA ACCTACGCCG ATCTGCAACA GGCGATCCAT
GCGTTGTCTG CCGCCTTCCC CGCCAGCGTG AACCGGTTGT CGCGCCCGCA GTAA
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| Protein sequence | MQTDMRQFLI ASTDPIERRQ APALQMILIA ISVAALVALI VFLAVLGVNP TSGVPAGGAV
LVMLASLAGV AALRRGYFRL AVLVPSAGLI VAVFFVTVIY GYPAATPFLP VMFIPVILTG
LLIETRPLLL IAAASALITA AIFLVNPVIA PFTTMVQPPG DLTIVAVALF LLVLFVVTTI
IALFGPVLRQ SLIAALARER ELEQLRDSLE ATVSERTAGL QEALRTVEQR EAQLQQALAD
LQASQVTIRE LSAPVLPVLP GVLIAPLVGA IDESRATVFV ANVLRAVERE RAQQVIFDVT
GVPLIDTQVA RMILQAADAV RLLGAQVILV GIRPEVAQTV VGLGVALDMK TYADLQQAIH
ALSAAFPASV NRLSRPQ
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