Gene RoseRS_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0042 
Symbol 
ID5206975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp46897 
End bp47316 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content54% 
IMG OID640593676 
Producthypothetical protein 
Protein accessionYP_001274435 
Protein GI148654230 
COG category[S] Function unknown 
COG ID[COG2832] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.701036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATA CAGACAAGAC ATCAACCGCA TCCACTGCGC CCTCAAACCC TCTTTTGCGT 
ACACTCTTAC TGGTGGGTGG AACGTTTTTT CTCATGCTCG GATTTTTGGG TGCGTTCCTG
CCGGTTCTCC CTTCAACACC CTTTTTTCTT CTGGCTGCTG CCCTGTTCTT CCGCTCTTCG
CCACGTCTGC ATCGCTGGAT GACCGGTCAT CCCTTAATCA GACCACATCT TCAGCGCTTT
CAGCAGGACC GTTCAATGAC CATGCGTGCA AAGGCGACTG TCCTGGGGCT TGCCTGGATC
GTGCTGCTCG CTGCGGCGAT CTTTCTGGTC GATAGCCTTT TTATGCGCGG TTTTCTCATC
GGACTGGCGA TTGTCAAGAC GATCGTCATT CTGCGTCTCA AGACTGCCCG ACCGTCGTAG
 
Protein sequence
MSNTDKTSTA STAPSNPLLR TLLLVGGTFF LMLGFLGAFL PVLPSTPFFL LAAALFFRSS 
PRLHRWMTGH PLIRPHLQRF QQDRSMTMRA KATVLGLAWI VLLAAAIFLV DSLFMRGFLI
GLAIVKTIVI LRLKTARPS