| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0040 |
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| Symbol | |
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| ID | 5206973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 43467 |
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| End bp | 45119 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640593674 |
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| Product | ABC transporter related |
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| Protein accession | YP_001274433 |
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| Protein GI | 148654228 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCTTGA ACATTGCCCT GTTTGCGATG GTGGGTTGGG CAATAGAGGG GCTAAGGGTC
GGTGCGTCCA TTTTCTCCAT TGGCACGCTG ATCGGCGCCT TGACCCTGAT CGCAGGCAAG
GGCTTCTCCG GATGGCTTGA GCGCTTTGCC GCAGCGCAGG CGGCAGCCGA CACGAAAATC
GCAGTTCGCG ATACGATCTA TGCCCATGCC CTGCAAATCG GACCGGTCGG GCTGGATCGT
GAGCGCACGG GCGAATTGGT CAATACCTCC GTCGATGGCA TGGACTGGCT GGAGCAGTAC
TATAGCATCT ACCTGGCGCA GTTCTTTGTT GGCATGATCA GCCCTGTGCT GGTCATCGCC
TACCTTGCCA CGCAGGATAT CGTGACAGCG CTGATTCTGC TGCTGGCATT GCCGCTGCCG
CCGCTCCTGC TGGGAGCGAC TTCCCAACGG TTCAAAGCAG TCAGCGATCG CTTTTTTGCG
ACTGCGAACC ATTTGAGTGC CCAGTTCCTC GACAGCCTGC AAGGATTGAC GACCCTCAAG
ATGTTCAATC AGGGAAAAGC TCGCGGCGAG CAGTTTCGTC AGGAAAATGA GACGCTACGC
CGGGAAACGA TGCGCCTGCT GGCGGTTAAT CAGATCATGC TGTTTGTCGT GGACGGTGGA
TTCGCCCTGG CGACAACGAC AGCGTTGACG CTCACATCGC TCTGGCGGCT GTCAACAGAC
AGCATTACGC TGGGAACAGC CGTTACCTTC GTCCTGCTCA GCTTCGAGCT TGCCCGCCCG
CTCAATCTTA TCGGGCAGTT TTTCTTCGCT GGCGCCATCG GTCGCGCAGT GGCGAAAAAG
ATTACCGCGT TTCTTGATAC GCCGCCAGGA GTCGCAGAGA CGTCTCCGTC GGCGCATACG
ATCACCATCA CCACTGCGCC TGATATTCGA TTGGAGGGTG TGACATTCCA GCATGTGGGA
AGAGACGCTC CTGCACTGGA CAATTTCTCG CTGACCATCC GGGCGGGTGA ACGGGTTGCG
CTGGTGGGGG CGAGCGGCGC CGGGAAGAGC ACGGTCTTCC ATTTGCTGCT CCGCTTTATC
GCAGCACAAA AGGGGACTAT TCTCATTAAT GGCATTCCTA TCTCGGAGTT TTCACCTGAC
CAGCTGCGTG CATCGATTTC ACTGGTATCG CAAGACCCCT ACATCTTCTA CGGAACTGTC
GAGGAAAATC TGCGGGTGGC AAAGCCCGAC GCAACCGCCG AGGAACTGGA ACGCGCCATG
CGCGCCGCAC ACTTTGATGA CGTTGTCGCG CAACTCCCCG CCGGTTTGAG CACCATTATC
GGCGAACGCG GCAGCACCCT GAGCGGCGGA CAGGCGCAGC GTCTGGCGCT GGCGCGTGCA
TTCCTGAAGG ACGCGCCGAT CGTGCTGCTC GACGAGCCAA CGTCACAACT TGATAGTCAG
ACTGAAGCGG TTATTCAGGA TTCTATCGAC CATCTCCTCA AAAATAAGAC GGTGATCATT
ATCGCTCACC GTTTGAGCAC GGCCAGTCGC GCCGATCACA TCGTGGTGAT GGAGCACGGA
CGAATTGTCG AGTCAGGTTC GCCTGCCGGG CTGCTGCGAC AGAACGGCGT ATTCGCACGT
ATGGTTCATC TCGCTTCAGG AGTTATGCGA TGA
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| Protein sequence | MVLNIALFAM VGWAIEGLRV GASIFSIGTL IGALTLIAGK GFSGWLERFA AAQAAADTKI
AVRDTIYAHA LQIGPVGLDR ERTGELVNTS VDGMDWLEQY YSIYLAQFFV GMISPVLVIA
YLATQDIVTA LILLLALPLP PLLLGATSQR FKAVSDRFFA TANHLSAQFL DSLQGLTTLK
MFNQGKARGE QFRQENETLR RETMRLLAVN QIMLFVVDGG FALATTTALT LTSLWRLSTD
SITLGTAVTF VLLSFELARP LNLIGQFFFA GAIGRAVAKK ITAFLDTPPG VAETSPSAHT
ITITTAPDIR LEGVTFQHVG RDAPALDNFS LTIRAGERVA LVGASGAGKS TVFHLLLRFI
AAQKGTILIN GIPISEFSPD QLRASISLVS QDPYIFYGTV EENLRVAKPD ATAEELERAM
RAAHFDDVVA QLPAGLSTII GERGSTLSGG QAQRLALARA FLKDAPIVLL DEPTSQLDSQ
TEAVIQDSID HLLKNKTVII IAHRLSTASR ADHIVVMEHG RIVESGSPAG LLRQNGVFAR
MVHLASGVMR
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