Gene RoseRS_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0030 
Symbol 
ID5206963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp31373 
End bp31807 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content56% 
IMG OID640593664 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_001274423 
Protein GI148654218 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.786698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGG TTCTTGTAAA TATTCCGTCT GTGCCGATTT TTGAGCGCGT CGTCCGCGCC 
AGCGCCGATG AGGTCGGACG TGCGCTGGGG TTCAGCGCCG AACGGGTCGA GGATCTGAAA
CTGGCGGTGA GCGAGGCGGT GAACAATGCG ATCGACCATG GCAATAAGCG TCAGCCCGGT
AAACTGGTGG AGGTTGTCTT TGCGCTCCAT AACGATAAAC TCGAGGTGCA CGTCACCGAT
GAGGGCGGAG GCATCGATAC CATCGATTTC TCGCGGAAAG TCGTCGATGA GCAGAATCTC
GATGCCGGCA TGCATCGCGG CTTTGGCATG TATCTGATCA GCGCACTGGT TGATGATTGC
GAGGTCAATT CGTCACAGTC GGGTACAACA CTGACACTAC GTCTCTATCG GAGGAACCAG
GACCATGACG AATGA
 
Protein sequence
MQQVLVNIPS VPIFERVVRA SADEVGRALG FSAERVEDLK LAVSEAVNNA IDHGNKRQPG 
KLVEVVFALH NDKLEVHVTD EGGGIDTIDF SRKVVDEQNL DAGMHRGFGM YLISALVDDC
EVNSSQSGTT LTLRLYRRNQ DHDE